FFCP PHASE1:Hg19::chr13:76210283..76210375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:76210283..76210375,- | |||
|coexpression_cluster_id=C2270 | |coexpression_cluster_id=C2270 | ||
|description=CAGE_peak_at_chr13:76210283..76210375,- | |description=CAGE_peak_at_chr13:76210283..76210375,- | ||
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|ontology_enrichment_celltype=CL:0000055!4.83e-22!180;CL:0000057!4.80e-14!75;CL:0002620!2.49e-08!23 | |ontology_enrichment_celltype=CL:0000055!4.83e-22!180;CL:0000057!4.80e-14!75;CL:0002620!2.49e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.21e-08;23 | |ontology_enrichment_celltype_v019=CL:0002620;9.21e-08;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.28e-13,76;CL:0002620,8.16e-08,23;CL:0000680,5.54e-07,58;CL:0000056,5.54e-07,58;CL:0000355,5.54e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.37e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;4.37e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.40e-11!365;UBERON:0000914!9.32e-09!83;UBERON:0002329!9.32e-09!83;UBERON:0003077!9.32e-09!83;UBERON:0003059!9.32e-09!83;UBERON:0007282!9.32e-09!83;UBERON:0009618!9.32e-09!83;UBERON:0007285!9.32e-09!83;UBERON:0002100!1.81e-08!216;UBERON:0004290!3.48e-08!70;UBERON:0000486!4.42e-08!82;UBERON:0005256!1.27e-07!143;UBERON:0003102!1.85e-07!95;UBERON:0000468!6.60e-07!659;UBERON:0004923!9.53e-07!57 | |ontology_enrichment_uberon=UBERON:0000475!2.40e-11!365;UBERON:0000914!9.32e-09!83;UBERON:0002329!9.32e-09!83;UBERON:0003077!9.32e-09!83;UBERON:0003059!9.32e-09!83;UBERON:0007282!9.32e-09!83;UBERON:0009618!9.32e-09!83;UBERON:0007285!9.32e-09!83;UBERON:0002100!1.81e-08!216;UBERON:0004290!3.48e-08!70;UBERON:0000486!4.42e-08!82;UBERON:0005256!1.27e-07!143;UBERON:0003102!1.85e-07!95;UBERON:0000468!6.60e-07!659;UBERON:0004923!9.53e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-07;9!UBERON:0000042;1.23e-07;9!UBERON:0003688;5.88e-07;6!UBERON:0002358;5.88e-07;6!UBERON:0003684;5.88e-07;6!UBERON:0001178;5.88e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-07;9!UBERON:0000042;1.23e-07;9!UBERON:0003688;5.88e-07;6!UBERON:0002358;5.88e-07;6!UBERON:0003684;5.88e-07;6!UBERON:0001178;5.88e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.31e-09,83;UBERON:0002329,1.70e-09,71;UBERON:0003059,1.70e-09,71;UBERON:0007282,1.70e-09,71;UBERON:0004290,1.70e-09,71;UBERON:0009618,1.70e-09,71;UBERON:0003077,3.34e-09,72;UBERON:0007285,3.34e-09,72;UBERON:0007524,6.42e-09,73;UBERON:0007503,1.54e-08,78;UBERON:0003104,3.67e-08,160;UBERON:0009142,3.67e-08,160;UBERON:0002199,3.07e-07,46;UBERON:0002416,3.07e-07,46;UBERON:0001134,4.46e-07,62;UBERON:0002036,4.46e-07,62;UBERON:0003082,4.46e-07,62;UBERON:0003688,6.27e-07,6;UBERON:0002358,6.27e-07,6;UBERON:0003684,6.27e-07,6;UBERON:0001178,6.27e-07,6;UBERON:0005256,8.13e-07,122;UBERON:0004923,8.51e-07,66 | |||
|phase1_expression=30.5219677174535,0.642301571672949,12.4039875604455,34.0249214400643,4.46961094427288,6.97870819280295,30.3959853801973,0.631719873426831,7.05201196139564,0.245733936501509,0.697801167972428,0.655324116390517,2.90143676051299,5.07442047136191,4.63956326019082,0,0,0,0.487932798790507,0,1.42800483870977,1.25381888591235,0.85870796139317,0.547497700291537,0.502170558379211,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,2.01210257911091,6.13740296848946,41.2040633718406,46.1230877785018,63.0082357479583,2.3858578411533,18.4921250715002,0,0,0.263504357079378,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0.735326160691737,0.81014194788176,0.357198913136319,0.898117490504679,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,3.72887606973458,12.4133933769425,0,0,9.62003438826924,0.311211035399766,0.134710672069688,0.163461903113459,2.72443369760877,0.576175924479999,1.87457145467037,1.24864030732128,0.570471821544449,4.93180645820944,1.76151747965647,1.78060238804945,1.12360645361799,4.69554593886255,2.08818339430006,8.6793656187643,20.1960485737949,1.7308685049499,7.28129089550421,14.3723628363248,0,0.125118519871964,6.92660288710457,0.877955241761676,57.6197056102157,2.25357088359895,2.60894021268048,0.538168907066586,2.13557388818567,13.7755735753715,0.300091096084402,0.618315175430633,9.79034052173391,57.1378748937981,1.85653965465393,12.3744996554722,2.52433774244115,29.0877679709666,0.80823028409406,10.2952781829818,21.6617011189427,10.0040749463188,0.193260853163297,1.36373060295417,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,3.12899064659632,1.92972281457866,8.28809528114883,15.3241416250553,14.4375896333917,0.118306800039844,0.674338760312407,0.964044119533928,0.55146986366197,0,0.237270619111097,0.404493924480493,0.784885860501384,0,0.738155454624648,7.01208869017229,0.4115740113314,2.94017422771084,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,3.58389135841357,1.03993478527958,0,0.579652024875384,2.58299127318808,0,1.85194205030644,2.66355813128438,0.790204397959275,0.858486162094873,0,0,0,0,0.671928512795438,0.425325291727159,0.716468181622786,0,1.53353071666084,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0,1.17217447210047,5.13217338068116,0.719792448923265,0.901029173531752,0.857479297891735,0.448524337381443,0,0.66004457238855,2.71470603091333,14.3062578340753,0,19.9453587438653,32.2423054425235,1.80045161983499,0,2.93064396917709,0,8.68194568626309,0.823240336780769,0,0.355391948742546,1.58390374586686,0,0,0.899756920638513,0,0,0,0,3.44585807502342,2.85273810081437,18.5320072534501,15.4107241912788,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,7.72956397830581,8.50289885801451,6.23909554509392,0.415941723061614,40.6818094457529,0.788512075169673,68.1763035257591,0.300946099727719,2.27407504055985,4.1389228517002,0.664225598535437,1.47495334833363,19.2881624119144,3.13281851940385,0.686286847621712,0.206768026122887,0,0,0.606255142892519,0,5.44302527993425,28.7805057069781,0.460385919864187,0.280660094433074,10.1229927912004,40.4248726762696,13.511729376063,16.325987308949,5.08891989548763,0.532685175939381,0.492762936082855,0,0.116210378459959,0.483437798366489,0,0,6.31479464905337,0.364182336013434,28.7162468761139,1.35359883872224,1.23224539367064,0,2.92278449306521,1.37217117560738,0,1.02056223165909,0,0,0,1.00337954770971,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0.256450125116389,1.31205858279882,0,0.309123034943167,0,0.165018999841176,0,0,1.6068392984416,4.8335359146061,0,0,0.689182862422653,0.107420244868274,0.290033387828457,0.681813019328807,2.04773681987496,0,0.384380134730212,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0,4.7907542728532,0.869932992075073,0.18532421910392,0,1.116475108079,2.53103539774981,2.47819252100972,3.07077349573601,2.56763392820352,5.72765846266686,0,0.179872457583315,3.29444435683266,2.70968525395079,9.70475911551917,1.58510321173008,0.421258456238981,1.95053495635836,14.1353823986145,4.22600587027022,0.409499734223957,14.7061649231861,5.65040583101214,0,0.66343897524122,0.438450885253763,4.05142873986681,1.9676842561399,8.31932545547087,1.8589409885985,3.66204283291914,3.01163839628508,6.9756819119316,13.9101710077688,2.83808851256478,22.1663017062547,17.4526293268748,0.379473173765715,0,0.288666338176536,0,1.0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| ||
|short_description=p@chr13:76210283..76210375,- | |short_description=p@chr13:76210283..76210375,- | ||
}} | }} |
Latest revision as of 17:06, 24 July 2015
Short description: | p@chr13:76210283..76210375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:76210283..76210375, - |
Coexpression cluster: | C2270_bone_basal_Fibroblast_Olfactory_Preadipocyte_Chondrocyte_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.28e-13 | 76 |
skin fibroblast | 8.16e-08 | 23 |
muscle precursor cell | 5.54e-07 | 58 |
myoblast | 5.54e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.31e-09 | 83 |
somite | 1.70e-09 | 71 |
presomitic mesoderm | 1.70e-09 | 71 |
presumptive segmental plate | 1.70e-09 | 71 |
dermomyotome | 1.70e-09 | 71 |
trunk paraxial mesoderm | 1.70e-09 | 71 |
paraxial mesoderm | 3.34e-09 | 72 |
presumptive paraxial mesoderm | 3.34e-09 | 72 |
dense mesenchyme tissue | 6.42e-09 | 73 |
epithelial vesicle | 1.54e-08 | 78 |
mesenchyme | 3.67e-08 | 160 |
entire embryonic mesenchyme | 3.67e-08 | 160 |
integument | 3.07e-07 | 46 |
integumental system | 3.07e-07 | 46 |
skeletal muscle tissue | 4.46e-07 | 62 |
striated muscle tissue | 4.46e-07 | 62 |
myotome | 4.46e-07 | 62 |
omentum | 6.27e-07 | 6 |
peritoneum | 6.27e-07 | 6 |
abdominal cavity | 6.27e-07 | 6 |
visceral peritoneum | 6.27e-07 | 6 |
trunk mesenchyme | 8.13e-07 | 122 |
organ component layer | 8.51e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.80e-08 | 14 |