FFCP PHASE1:Hg19::chr3:105975093..105975118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:105975093..105975118,+ | |||
|coexpression_cluster_id=C995 | |coexpression_cluster_id=C995 | ||
|description=CAGE_peak_at_chr3:105975093..105975118,+ | |description=CAGE_peak_at_chr3:105975093..105975118,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.51e-81!24;CL:0000826!1.51e-81!24;CL:0000236!2.99e-48!14;CL:0000542!1.43e-39!53;CL:0000051!1.43e-39!53;CL:0000838!6.95e-36!52;CL:0002087!1.94e-17!119;CL:0000785!3.61e-15!2;CL:0000955!3.61e-15!2;CL:0000818!3.61e-15!2;CL:0000954!3.61e-15!2;CL:0000816!3.61e-15!2;CL:0000738!2.76e-14!140;CL:0002031!5.69e-13!124;CL:0000037!5.95e-11!172;CL:0000566!5.95e-11!172;CL:0000817!2.05e-10!3;CL:0002032!3.18e-10!165;CL:0000837!3.18e-10!165;CL:0000988!3.78e-10!182;CL:0000946!1.63e-08!1;CL:0000786!1.63e-08!1;CL:0000980!1.63e-08!1;CL:0000819!2.33e-08!1 | |ontology_enrichment_celltype=CL:0000945!1.51e-81!24;CL:0000826!1.51e-81!24;CL:0000236!2.99e-48!14;CL:0000542!1.43e-39!53;CL:0000051!1.43e-39!53;CL:0000838!6.95e-36!52;CL:0002087!1.94e-17!119;CL:0000785!3.61e-15!2;CL:0000955!3.61e-15!2;CL:0000818!3.61e-15!2;CL:0000954!3.61e-15!2;CL:0000816!3.61e-15!2;CL:0000738!2.76e-14!140;CL:0002031!5.69e-13!124;CL:0000037!5.95e-11!172;CL:0000566!5.95e-11!172;CL:0000817!2.05e-10!3;CL:0002032!3.18e-10!165;CL:0000837!3.18e-10!165;CL:0000988!3.78e-10!182;CL:0000946!1.63e-08!1;CL:0000786!1.63e-08!1;CL:0000980!1.63e-08!1;CL:0000819!2.33e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.08e-82;24!CL:0000542;8.12e-26;53!CL:0000236;1.49e-20;13!CL:0000946;8.72e-18;1!CL:0000786;8.72e-18;1 | |ontology_enrichment_celltype_v019=CL:0000945;6.08e-82;24!CL:0000542;8.12e-26;53!CL:0000236;1.49e-20;13!CL:0000946;8.72e-18;1!CL:0000786;8.72e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.66e-82,24;CL:0000826,5.66e-82,24;CL:0000838,1.51e-37,52;CL:0000542,7.95e-37,53;CL:0000051,7.95e-37,53;CL:0000236,2.48e-29,14;CL:0000946,8.72e-18,1;CL:0000786,8.72e-18,1;CL:0000980,8.72e-18,1;CL:0002087,1.98e-16,115;CL:0002031,1.02e-15,120;CL:0000738,8.82e-14,136;CL:0002032,1.62e-11,161;CL:0000837,1.62e-11,161;CL:0000037,5.32e-11,168;CL:0000988,2.14e-10,177;CL:0000785,1.44e-09,2;CL:0000955,1.44e-09,2;CL:0000818,1.44e-09,2;CL:0000954,1.44e-09,2;CL:0000816,1.44e-09,2;CL:0000817,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.12e-26;53!UBERON:0001045;8.72e-18;1!CL:0000954;1.44e-09;2 | |ontology_enrichment_development_v019=CL:0000051;8.12e-26;53!UBERON:0001045;8.72e-18;1!CL:0000954;1.44e-09;2 | ||
|ontology_enrichment_disease=DOID:0060058!3.16e-17!10;DOID:0060073!2.33e-08!1;DOID:8675!2.33e-08!1;DOID:12603!2.69e-08!1;DOID:2355!3.83e-08!1 | |ontology_enrichment_disease=DOID:0060058!3.16e-17!10;DOID:0060073!2.33e-08!1;DOID:8675!2.33e-08!1;DOID:12603!2.69e-08!1;DOID:2355!3.83e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.57e-07;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.57e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.62e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.42e-10!3;UBERON:0004854!5.42e-10!3;UBERON:0009034!5.42e-10!3;UBERON:0002095!5.42e-10!3;UBERON:0004782!5.42e-10!3;UBERON:0003281!5.42e-10!3;UBERON:0009664!5.42e-10!3;UBERON:0002296!5.42e-10!3;UBERON:0005602!5.42e-10!3;UBERON:0001179!5.42e-10!3;UBERON:0006293!5.42e-10!3;UBERON:0001154!1.75e-08!1;UBERON:0001153!1.75e-08!1;UBERON:0001736!3.33e-08!1;UBERON:0006298!3.33e-08!1 | |ontology_enrichment_uberon=UBERON:0002106!5.42e-10!3;UBERON:0004854!5.42e-10!3;UBERON:0009034!5.42e-10!3;UBERON:0002095!5.42e-10!3;UBERON:0004782!5.42e-10!3;UBERON:0003281!5.42e-10!3;UBERON:0009664!5.42e-10!3;UBERON:0002296!5.42e-10!3;UBERON:0005602!5.42e-10!3;UBERON:0001179!5.42e-10!3;UBERON:0006293!5.42e-10!3;UBERON:0001154!1.75e-08!1;UBERON:0001153!1.75e-08!1;UBERON:0001736!3.33e-08!1;UBERON:0006298!3.33e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.72e-18;1!UBERON:0001153;8.72e-18;1!UBERON:0009854;8.72e-18;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;8.72e-18;1!UBERON:0001153;8.72e-18;1!UBERON:0009854;8.72e-18;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.03e-17,1;UBERON:0001153,1.03e-17,1;UBERON:0001045,1.03e-17,1 | |||
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|short_description=p@chr3:105975093..105975118,+ | |short_description=p@chr3:105975093..105975118,+ | ||
}} | }} |
Latest revision as of 13:58, 29 July 2015
Short description: | p@chr3:105975093..105975118, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:105975093..105975118, + |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.66e-82 | 24 |
pro-B cell | 5.66e-82 | 24 |
lymphoid lineage restricted progenitor cell | 1.51e-37 | 52 |
lymphocyte | 7.95e-37 | 53 |
common lymphoid progenitor | 7.95e-37 | 53 |
B cell | 2.48e-29 | 14 |
antibody secreting cell | 8.72e-18 | 1 |
plasma cell | 8.72e-18 | 1 |
plasmablast | 8.72e-18 | 1 |
nongranular leukocyte | 1.98e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-15 | 120 |
leukocyte | 8.82e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.62e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-11 | 161 |
hematopoietic stem cell | 5.32e-11 | 168 |
hematopoietic cell | 2.14e-10 | 177 |
mature B cell | 1.44e-09 | 2 |
pre-B-II cell | 1.44e-09 | 2 |
transitional stage B cell | 1.44e-09 | 2 |
small pre-B-II cell | 1.44e-09 | 2 |
immature B cell | 1.44e-09 | 2 |
precursor B cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.03e-17 | 1 |
caecum | 1.03e-17 | 1 |
midgut | 1.03e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.62e-07 | 10 |