FFCP PHASE1:Hg19::chr1:28503842..28503847,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=-143bp_to_ENST00000373857_5end | |association_with_transcript=-143bp_to_ENST00000373857_5end | ||
|cluster_id=chr1:28503842..28503847,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_11_at_PTAFR_5end | |description=CAGE_peak_11_at_PTAFR_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!4.82e-20!24;CL:0000826!4.82e-20!24;CL:0002032!6.58e-20!165;CL:0000837!6.58e-20!165;CL:0000037!7.57e-19!172;CL:0000566!7.57e-19!172;CL:0002031!2.12e-18!124;CL:0000988!1.80e-17!182;CL:0002274!3.22e-17!5;CL:0000457!3.22e-17!5;CL:0002191!3.22e-17!5;CL:0000097!3.22e-17!5;CL:0000831!3.22e-17!5;CL:0002028!3.22e-17!5;CL:0000738!1.06e-15!140;CL:0002087!1.35e-12!119;CL:0000785!6.13e-11!2;CL:0000955!6.13e-11!2;CL:0000818!6.13e-11!2;CL:0000954!6.13e-11!2;CL:0000816!6.13e-11!2;CL:0000763!1.28e-10!112;CL:0000049!1.28e-10!112;CL:0000838!5.35e-10!52;CL:0000542!9.06e-10!53;CL:0000051!9.06e-10!53;CL:0000163!1.32e-09!9;CL:0000839!1.89e-09!70;CL:0000557!2.78e-09!71;CL:0000766!1.64e-08!76;CL:0000817!1.43e-07!3 | |ontology_enrichment_celltype=CL:0000945!4.82e-20!24;CL:0000826!4.82e-20!24;CL:0002032!6.58e-20!165;CL:0000837!6.58e-20!165;CL:0000037!7.57e-19!172;CL:0000566!7.57e-19!172;CL:0002031!2.12e-18!124;CL:0000988!1.80e-17!182;CL:0002274!3.22e-17!5;CL:0000457!3.22e-17!5;CL:0002191!3.22e-17!5;CL:0000097!3.22e-17!5;CL:0000831!3.22e-17!5;CL:0002028!3.22e-17!5;CL:0000738!1.06e-15!140;CL:0002087!1.35e-12!119;CL:0000785!6.13e-11!2;CL:0000955!6.13e-11!2;CL:0000818!6.13e-11!2;CL:0000954!6.13e-11!2;CL:0000816!6.13e-11!2;CL:0000763!1.28e-10!112;CL:0000049!1.28e-10!112;CL:0000838!5.35e-10!52;CL:0000542!9.06e-10!53;CL:0000051!9.06e-10!53;CL:0000163!1.32e-09!9;CL:0000839!1.89e-09!70;CL:0000557!2.78e-09!71;CL:0000766!1.64e-08!76;CL:0000817!1.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.15e-30;24!CL:0000542;4.55e-07;53!CL:0000097;6.21e-07;5 | |ontology_enrichment_celltype_v019=CL:0000945;9.15e-30;24!CL:0000542;4.55e-07;53!CL:0000097;6.21e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.12e-30,24;CL:0000826,8.12e-30,24;CL:0000838,5.23e-14,52;CL:0000542,9.46e-14,53;CL:0000051,9.46e-14,53;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.16e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000738,1.15e-07,136;CL:0000097,6.77e-07,5;CL:0002028,6.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;4.55e-07;53 | |ontology_enrichment_development_v019=CL:0000051;4.55e-07;53 | ||
|ontology_enrichment_disease=DOID:0060058!1.81e-08!10;DOID:2355!8.81e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.81e-08!10;DOID:2355!8.81e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.73e-29;1!DOID:74;2.21e-15;2!DOID:1287;2.35e-08;4 | |ontology_enrichment_disease_v019=DOID:2355;2.73e-29;1!DOID:74;2.21e-15;2!DOID:1287;2.35e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,1.78e-29,1;DOID:74,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.80e-08!86;UBERON:0002371!5.81e-08!80;UBERON:0002390!6.89e-08!102;UBERON:0003061!6.89e-08!102;UBERON:0002193!6.37e-07!112;UBERON:0004765!8.17e-07!101;UBERON:0001434!8.17e-07!101 | |ontology_enrichment_uberon=UBERON:0001474!1.80e-08!86;UBERON:0002371!5.81e-08!80;UBERON:0002390!6.89e-08!102;UBERON:0003061!6.89e-08!102;UBERON:0002193!6.37e-07!112;UBERON:0004765!8.17e-07!101;UBERON:0001434!8.17e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41210035755127,4.92603536699674,5.98201937983962,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,1.05658120815871,0.414656231081544,0.576479813667846,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,1.1241165257259,0.605399121573143,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41210035755127,4.92603536699674,5.98201937983962,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,1.05658120815871,0.414656231081544,0.576479813667846,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,1.1241165257259,0.605399121573143,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p11@PTAFR | |short_description=p11@PTAFR | ||
}} | }} |
Latest revision as of 10:01, 17 September 2015
Short description: | p11@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -143bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.12e-30 | 24 |
pro-B cell | 8.12e-30 | 24 |
lymphoid lineage restricted progenitor cell | 5.23e-14 | 52 |
lymphocyte | 9.46e-14 | 53 |
common lymphoid progenitor | 9.46e-14 | 53 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
leukocyte | 1.15e-07 | 136 |
mast cell | 6.77e-07 | 5 |
basophil mast progenitor cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.78e-29 | 1 |
hematopoietic system disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |