FFCP PHASE1:Hg19::chr8:31667277..31667281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:31667277..31667281,+ | |||
|coexpression_cluster_id=C961 | |coexpression_cluster_id=C961 | ||
|description=CAGE_peak_at_chr8:31667277..31667281,+ | |description=CAGE_peak_at_chr8:31667277..31667281,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!8.90e-07!2 | |ontology_enrichment_celltype=CL:0000242!8.90e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000746;6.32e-07;3 | |ontology_enrichment_celltype_v019=CL:0000746;6.32e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.14e-07,3;CL:0000513,6.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.32e-07;3!UBERON:0006215;8.62e-07;3 | |ontology_enrichment_development_v019=CL:0000513;6.32e-07;3!UBERON:0006215;8.62e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;8.72e-18;1!DOID:4549;8.72e-18;1!DOID:5861;8.72e-18;1!DOID:6496;8.72e-18;1!DOID:3119;3.24e-11;14!DOID:171;1.57e-07;10 | |ontology_enrichment_disease_v019=DOID:3371;8.72e-18;1!DOID:4549;8.72e-18;1!DOID:5861;8.72e-18;1!DOID:6496;8.72e-18;1!DOID:3119;3.24e-11;14!DOID:171;1.57e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,5.26e-18,1;DOID:4549,5.26e-18,1;DOID:5861,5.26e-18,1;DOID:6496,5.26e-18,1;DOID:3119,3.60e-11,14;DOID:171,1.57e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;3.06e-34;2!UBERON:0002757;3.06e-34;2!UBERON:0010134;3.06e-34;2!UBERON:0005408;3.06e-34;2!UBERON:0001899;3.06e-34;2!UBERON:0003296;1.12e-17;4!UBERON:0010133;1.12e-17;4!UBERON:0002784;1.12e-17;4!UBERON:0001894;1.61e-10;7!UBERON:0002418;8.62e-07;3!UBERON:0004755;8.62e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001905;3.06e-34;2!UBERON:0002757;3.06e-34;2!UBERON:0010134;3.06e-34;2!UBERON:0005408;3.06e-34;2!UBERON:0001899;3.06e-34;2!UBERON:0003296;1.12e-17;4!UBERON:0010133;1.12e-17;4!UBERON:0002784;1.12e-17;4!UBERON:0001894;1.61e-10;7!UBERON:0002418;8.62e-07;3!UBERON:0004755;8.62e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.00e-34,2;UBERON:0002757,6.00e-34,2;UBERON:0010134,6.00e-34,2;UBERON:0005408,6.00e-34,2;UBERON:0001899,6.00e-34,2;UBERON:0003296,1.57e-17,4;UBERON:0010133,1.57e-17,4;UBERON:0002784,1.57e-17,4;UBERON:0001894,1.94e-10,7;UBERON:0006222,1.94e-10,7;UBERON:0002418,7.28e-07,3;UBERON:0004755,7.28e-07,3 | |||
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| ||
|short_description=p@chr8:31667277..31667281,+ | |short_description=p@chr8:31667277..31667281,+ | ||
}} | }} |
Latest revision as of 17:58, 31 July 2015
Short description: | p@chr8:31667277..31667281, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:31667277..31667281, + |
Coexpression cluster: | C961_pineal_parietal_gastrointestinal_pons_pituitary_cerebellum_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.14e-07 | 3 |
cardiac muscle myoblast | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.00e-34 | 2 |
regional part of epithalamus | 6.00e-34 | 2 |
secretory circumventricular organ | 6.00e-34 | 2 |
circumventricular organ | 6.00e-34 | 2 |
epithalamus | 6.00e-34 | 2 |
gland of diencephalon | 1.57e-17 | 4 |
neuroendocrine gland | 1.57e-17 | 4 |
regional part of diencephalon | 1.57e-17 | 4 |
diencephalon | 1.94e-10 | 7 |
future diencephalon | 1.94e-10 | 7 |
cartilage tissue | 7.28e-07 | 3 |
skeletal tissue | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.26e-18 | 1 |
extraosseous chondrosarcoma | 5.26e-18 | 1 |
myxoid chondrosarcoma | 5.26e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 5.26e-18 | 1 |
gastrointestinal system cancer | 3.60e-11 | 14 |
neuroectodermal tumor | 1.57e-07 | 10 |