FFCP PHASE1:Hg19::chr20:49348083..49348096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84612 | |EntrezGene=84612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16245 | |HGNC=16245 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYG5 | |UniProt=Q9BYG5 | ||
|association_with_transcript=2bp_to_ENST00000371610,NM_032521,uc002xvo.2_5end | |association_with_transcript=2bp_to_ENST00000371610,NM_032521,uc002xvo.2_5end | ||
|cluster_id=chr20:49348083..49348096,+ | |||
|coexpression_cluster_id=C1871 | |coexpression_cluster_id=C1871 | ||
|description=CAGE_peak_3_at_PARD6B_5end | |description=CAGE_peak_3_at_PARD6B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!1.69e-12!254 | |ontology_enrichment_celltype=CL:0000066!1.69e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.59e-10;7!CL:0000586;3.59e-10;7 | |ontology_enrichment_celltype_v019=CL:0000039;3.59e-10;7!CL:0000586;3.59e-10;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-11,253;CL:0000039,1.79e-10,7;CL:0000586,1.79e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.24e-12;30!UBERON:0009117;8.80e-09;10!UBERON:0005564;8.80e-09;10 | |ontology_enrichment_development_v019=UBERON:0001041;3.24e-12;30!UBERON:0009117;8.80e-09;10!UBERON:0005564;8.80e-09;10 | ||
|ontology_enrichment_disease=DOID:305!3.91e-32!106;DOID:0050687!2.69e-31!143;DOID:162!2.61e-25!235;DOID:14566!1.96e-24!239;DOID:299!2.53e-13!25;DOID:7!6.84e-09!39;DOID:0050686!6.61e-08!137 | |ontology_enrichment_disease=DOID:305!3.91e-32!106;DOID:0050687!2.69e-31!143;DOID:162!2.61e-25!235;DOID:14566!1.96e-24!239;DOID:299!2.53e-13!25;DOID:7!6.84e-09!39;DOID:0050686!6.61e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:299;5.49e-16;25!DOID:305;1.27e-09;106!DOID:7;2.22e-08;39!DOID:5093;1.26e-07;4!DOID:1612;1.26e-07;4 | |ontology_enrichment_disease_v019=DOID:299;5.49e-16;25!DOID:305;1.27e-09;106!DOID:7;2.22e-08;39!DOID:5093;1.26e-07;4!DOID:1612;1.26e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.73e-27,106;DOID:0050687,1.51e-25,143;DOID:299,4.44e-16,25;DOID:162,1.71e-11,235;DOID:14566,6.72e-11,239;DOID:7,7.46e-10,39;DOID:5093,1.85e-07,4;DOID:1612,1.85e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005177!7.60e-11!107;UBERON:0004921!2.26e-09!129;UBERON:0004185!2.26e-09!129;UBERON:0001007!4.47e-09!155;UBERON:0001555!4.47e-09!155;UBERON:0007026!4.47e-09!155;UBERON:0000077!1.56e-08!130;UBERON:0005911!2.96e-08!82;UBERON:0000466!2.99e-08!126;UBERON:0004119!6.32e-08!169;UBERON:0000925!6.32e-08!169;UBERON:0006595!6.32e-08!169;UBERON:0005172!1.02e-07!55;UBERON:0005173!1.02e-07!55;UBERON:0005409!2.45e-07!35;UBERON:0005156!7.34e-07!59;UBERON:0000990!7.34e-07!59;UBERON:0003886!9.43e-07!63 | |ontology_enrichment_uberon=UBERON:0005177!7.60e-11!107;UBERON:0004921!2.26e-09!129;UBERON:0004185!2.26e-09!129;UBERON:0001007!4.47e-09!155;UBERON:0001555!4.47e-09!155;UBERON:0007026!4.47e-09!155;UBERON:0000077!1.56e-08!130;UBERON:0005911!2.96e-08!82;UBERON:0000466!2.99e-08!126;UBERON:0004119!6.32e-08!169;UBERON:0000925!6.32e-08!169;UBERON:0006595!6.32e-08!169;UBERON:0005172!1.02e-07!55;UBERON:0005173!1.02e-07!55;UBERON:0005409!2.45e-07!35;UBERON:0005156!7.34e-07!59;UBERON:0000990!7.34e-07!59;UBERON:0003886!9.43e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000058;1.14e-10;10!UBERON:0005631;1.08e-08;10!UBERON:0000158;1.08e-08;10!UBERON:0002294;5.98e-08;7!UBERON:0001173;5.98e-08;7!UBERON:0003135;2.55e-07;11!UBERON:0002394;8.20e-07;4!UBERON:0003928;8.20e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000058;1.14e-10;10!UBERON:0005631;1.08e-08;10!UBERON:0000158;1.08e-08;10!UBERON:0002294;5.98e-08;7!UBERON:0001173;5.98e-08;7!UBERON:0003135;2.55e-07;11!UBERON:0002394;8.20e-07;4!UBERON:0003928;8.20e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.38e-13,101;UBERON:0009569,9.44e-09,112;UBERON:0005172,8.09e-08,54;UBERON:0005173,8.09e-08,54;UBERON:0003135,2.01e-07,11;UBERON:0005631,3.19e-07,14;UBERON:0000158,3.19e-07,14;UBERON:0002113,4.52e-07,26;UBERON:0003918,4.52e-07,26;UBERON:0011143,4.52e-07,26;UBERON:0005095,4.52e-07,26;UBERON:0007687,4.52e-07,26;UBERON:0002323,4.90e-07,46;UBERON:0004921,5.53e-07,118;UBERON:0005911,8.12e-07,82 | |||
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| ||
|short_description=p3@PARD6B | |short_description=p3@PARD6B | ||
}} | }} |
Latest revision as of 22:18, 16 September 2015
Short description: | p3@PARD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PARD6B_5end |
Coexpression cluster: | C1871_breast_MCF7_clear_renal_amniotic_leiomyoblastoma_choriocarcinoma |
Association with transcript: | 2bp_to_ENST00000371610, NM_032521, uc002xvo.2_5end |
EntrezGene: | PARD6B |
HGNC: | 16245 |
UniProt: | Q9BYG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.97e-11 | 253 |
germ line cell | 1.79e-10 | 7 |
germ cell | 1.79e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.38e-13 | 101 |
subdivision of trunk | 9.44e-09 | 112 |
abdomen element | 8.09e-08 | 54 |
abdominal segment element | 8.09e-08 | 54 |
male reproductive organ | 2.01e-07 | 11 |
extraembryonic membrane | 3.19e-07 | 14 |
membranous layer | 3.19e-07 | 14 |
kidney | 4.52e-07 | 26 |
kidney mesenchyme | 4.52e-07 | 26 |
upper urinary tract | 4.52e-07 | 26 |
kidney rudiment | 4.52e-07 | 26 |
kidney field | 4.52e-07 | 26 |
body cavity | 4.90e-07 | 46 |
subdivision of digestive tract | 5.53e-07 | 118 |
endo-epithelium | 8.12e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.73e-27 | 106 |
cell type cancer | 1.51e-25 | 143 |
adenocarcinoma | 4.44e-16 | 25 |
cancer | 1.71e-11 | 235 |
disease of cellular proliferation | 6.72e-11 | 239 |
disease of anatomical entity | 7.46e-10 | 39 |
thoracic cancer | 1.85e-07 | 4 |
breast cancer | 1.85e-07 | 4 |