FFCP PHASE1:Hg19::chr3:107938399..107938414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55081 | |EntrezGene=55081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17367 | |HGNC=17367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000485979_5end | |association_with_transcript=-8bp_to_ENST00000485979_5end | ||
|cluster_id=chr3:107938399..107938414,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_6_at_IFT57_5end | |description=CAGE_peak_6_at_IFT57_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.69e-30!24;CL:0000826!1.69e-30!24;CL:0000236!7.14e-22!14;CL:0000542!1.58e-16!53;CL:0000051!1.58e-16!53;CL:0000838!2.05e-15!52;CL:0002087!9.05e-08!119 | |ontology_enrichment_celltype=CL:0000945!1.69e-30!24;CL:0000826!1.69e-30!24;CL:0000236!7.14e-22!14;CL:0000542!1.58e-16!53;CL:0000051!1.58e-16!53;CL:0000838!2.05e-15!52;CL:0002087!9.05e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.97e-96;13!CL:0000945;7.03e-80;24!CL:0000542;4.57e-31;53!CL:0000785;4.06e-10;1!CL:0000819;4.06e-10;1!CL:0002087;5.93e-07;104 | |ontology_enrichment_celltype_v019=CL:0000236;5.97e-96;13!CL:0000945;7.03e-80;24!CL:0000542;4.57e-31;53!CL:0000785;4.06e-10;1!CL:0000819;4.06e-10;1!CL:0002087;5.93e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.89e-89,14;CL:0000945,7.23e-80,24;CL:0000826,7.23e-80,24;CL:0000542,9.58e-40,53;CL:0000051,9.58e-40,53;CL:0000838,1.43e-35,52;CL:0002087,1.05e-16,115;CL:0002031,7.79e-14,120;CL:0000738,1.01e-13,136;CL:0002032,3.56e-11,161;CL:0000837,3.56e-11,161;CL:0000037,1.35e-10,168;CL:0000819,4.06e-10,1;CL:0000988,6.42e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.57e-31;53!UBERON:0001045;6.33e-10;1 | |ontology_enrichment_development_v019=CL:0000051;4.57e-31;53!UBERON:0001045;6.33e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.06e-10;1!DOID:8675;4.06e-10;1!DOID:12603;6.33e-10;1!DOID:0060058;2.49e-08;10 | |ontology_enrichment_disease_v019=DOID:0060073;4.06e-10;1!DOID:8675;4.06e-10;1!DOID:12603;6.33e-10;1!DOID:0060058;2.49e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.06e-10,1;DOID:8675,4.06e-10,1;DOID:12603,6.91e-10,1;DOID:0060058,2.53e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.91e-10!15;UBERON:0000179!1.91e-10!15;UBERON:0000463!1.91e-10!15;UBERON:0007023!1.05e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!1.91e-10!15;UBERON:0000179!1.91e-10!15;UBERON:0000463!1.91e-10!15;UBERON:0007023!1.05e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.95e-14;15!UBERON:0000179;5.95e-14;15!UBERON:0000463;5.95e-14;15!UBERON:0001154;6.33e-10;1!UBERON:0001153;6.33e-10;1!UBERON:0009854;6.33e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.95e-14;15!UBERON:0000179;5.95e-14;15!UBERON:0000463;5.95e-14;15!UBERON:0001154;6.33e-10;1!UBERON:0001153;6.33e-10;1!UBERON:0009854;6.33e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.95e-14,15;UBERON:0000179,5.95e-14,15;UBERON:0000463,5.95e-14,15;UBERON:0001154,6.33e-10,1;UBERON:0001153,6.33e-10,1;UBERON:0001045,6.33e-10,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,5.34523684004081,0.853015394924529,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.839662001519,12.0150494477669,22.2377313465889,14.9355577898278,17.6174234295845,17.2425731986345,10.5767179645578,17.1729675816366,11.384259382189,4.69789751496751,4.96955196562797,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,1.19115887728894,2.46817363851717,1.29694662238543,1.62009431171434,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,2.21027132424918,0,0,10.8314628805741,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.865554558968364,0,0,0,0,0,0,0,0,0.234264445725339,8.0280107254893,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,0,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,0.641136984606466 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,5.34523684004081,0.853015394924529,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.839662001519,12.0150494477669,22.2377313465889,14.9355577898278,17.6174234295845,17.2425731986345,10.5767179645578,17.1729675816366,11.384259382189,4.69789751496751,4.96955196562797,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,1.19115887728894,2.46817363851717,1.29694662238543,1.62009431171434,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,2.21027132424918,0,0,10.8314628805741,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.865554558968364,0,0,0,0,0,0,0,0,0.234264445725339,8.0280107254893,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,0,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,0.641136984606466 | ||
|short_description=p6@IFT57 | |short_description=p6@IFT57 | ||
}} | }} |
Latest revision as of 11:12, 19 September 2015
Short description: | p6@IFT57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IFT57_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -8bp_to_ENST00000485979_5end |
EntrezGene: | IFT57 |
HGNC: | 17367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.89e-89 | 14 |
lymphocyte of B lineage | 7.23e-80 | 24 |
pro-B cell | 7.23e-80 | 24 |
lymphocyte | 9.58e-40 | 53 |
common lymphoid progenitor | 9.58e-40 | 53 |
lymphoid lineage restricted progenitor cell | 1.43e-35 | 52 |
nongranular leukocyte | 1.05e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 7.79e-14 | 120 |
leukocyte | 1.01e-13 | 136 |
hematopoietic oligopotent progenitor cell | 3.56e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.56e-11 | 161 |
hematopoietic stem cell | 1.35e-10 | 168 |
B-1 B cell | 4.06e-10 | 1 |
hematopoietic cell | 6.42e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 5.95e-14 | 15 |
haemolymphatic fluid | 5.95e-14 | 15 |
organism substance | 5.95e-14 | 15 |
vermiform appendix | 6.33e-10 | 1 |
caecum | 6.33e-10 | 1 |
midgut | 6.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.06e-10 | 1 |
lymphosarcoma | 4.06e-10 | 1 |
acute leukemia | 6.91e-10 | 1 |
lymphoma | 2.53e-08 | 10 |