FFCP PHASE1:Hg19::chr20:42193811..42193831,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:42193811..42193831,+
|short_description=p4@SGK2
|description=CAGE_peak_4_at_SGK2_5end
|association_with_transcript=-14bp_to_uc002xku.2_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10110 | |EntrezGene=10110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13900 | |HGNC=13900 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc002xku.2_5end | |||
|cluster_id=chr20:42193811..42193831,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SGK2_5end | |||
|id=chr20:42193811..42193831,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.49e-21;82!UBERON:0006241;4.12e-16;3!UBERON:0003057;4.12e-16;3!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206!UBERON:0005425;9.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SGK2 | |||
}} | }} |
Latest revision as of 06:53, 16 September 2015
Short description: | p4@SGK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SGK2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -14bp_to_uc002xku.2_5end |
EntrezGene: | SGK2 |
HGNC: | 13900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data