FFCP PHASE1:Hg19::chr20:43108534..43108543,+: Difference between revisions
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|id=chr20:43108534..43108543,+
|short_description=p5@TTPAL
|description=CAGE_peak_5_at_TTPAL_5end
|association_with_transcript=-65bp_to_uc010ggr.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79183 | |EntrezGene=79183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16114 | |HGNC=16114 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_uc010ggr.1_5end | |||
|cluster_id=chr20:43108534..43108543,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_TTPAL_5end | |||
|id=chr20:43108534..43108543,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.85e-10!12;CL:0000417!1.85e-10!12;CL:0000668!1.85e-10!12;CL:0000414!1.85e-10!12;CL:0000412!1.85e-10!12;CL:0000182!1.85e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.80e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.11e-13;11!UBERON:0009497;4.15e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.25e-27!26;UBERON:0002107!2.94e-24!19;UBERON:0006925!2.94e-24!19;UBERON:0008836!2.94e-24!19;UBERON:0008835!4.86e-21!22;UBERON:0003894!4.86e-21!22;UBERON:0009854!3.75e-20!23;UBERON:0007499!1.37e-18!25;UBERON:0009497!1.37e-18!25;UBERON:0000015!1.37e-18!25;UBERON:0002423!1.37e-18!25;UBERON:0006235!1.37e-18!25;UBERON:0004161!1.37e-18!25;UBERON:0009856!6.73e-18!26;UBERON:0002365!4.18e-15!31;UBERON:0002330!4.18e-15!31;UBERON:0002368!1.92e-13!35;UBERON:0005172!3.57e-13!55;UBERON:0005173!3.57e-13!55;UBERON:0002417!6.51e-12!61;UBERON:0000916!6.51e-12!61;UBERON:0002106!1.20e-10!3;UBERON:0004854!1.20e-10!3;UBERON:0009034!1.20e-10!3;UBERON:0002095!1.20e-10!3;UBERON:0004782!1.20e-10!3;UBERON:0003281!1.20e-10!3;UBERON:0009664!1.20e-10!3;UBERON:0002296!1.20e-10!3;UBERON:0005602!1.20e-10!3;UBERON:0001179!1.20e-10!3;UBERON:0006293!1.20e-10!3;UBERON:0000949!1.44e-10!45;UBERON:0003929!6.97e-09!54;UBERON:0002530!3.63e-08!59;UBERON:0001041!1.60e-07!98;UBERON:0005177!6.61e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.54e-28;19!UBERON:0006925;3.54e-28;19!UBERON:0002423;1.35e-21;25!UBERON:0002365;2.28e-17;31!UBERON:0002330;2.28e-17;31!UBERON:0002368;1.33e-14;33!UBERON:0000949;1.49e-10;43!UBERON:0005172;3.26e-08;52!UBERON:0005173;3.26e-08;52!UBERON:0002417;4.70e-07;58!UBERON:0000916;4.70e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.54e-28,19;UBERON:0006925,3.54e-28,19;UBERON:0008836,3.54e-28,19;UBERON:0008835,1.93e-24,22;UBERON:0003894,1.93e-24,22;UBERON:0009854,2.07e-23,23;UBERON:0007499,1.35e-21,25;UBERON:0009497,1.35e-21,25;UBERON:0000015,1.35e-21,25;UBERON:0002423,1.35e-21,25;UBERON:0006235,1.35e-21,25;UBERON:0004161,1.35e-21,25;UBERON:0009856,8.56e-21,26;UBERON:0002365,1.49e-17,31;UBERON:0002330,1.49e-17,31;UBERON:0002368,1.27e-15,35;UBERON:0000949,2.74e-12,45;UBERON:0003929,2.46e-10,54;UBERON:0005172,2.46e-10,54;UBERON:0005173,2.46e-10,54;UBERON:0002530,1.66e-09,59;UBERON:0002417,2.35e-09,60;UBERON:0000916,2.35e-09,60;UBERON:0005911,5.63e-07,82 | |||
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|short_description=p5@TTPAL | |||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p5@TTPAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TTPAL_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -65bp_to_uc010ggr.1_5end |
EntrezGene: | TTPAL |
HGNC: | 16114 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.54e-28 | 19 |
digestive gland | 3.54e-28 | 19 |
liver bud | 3.54e-28 | 19 |
hepatic diverticulum | 1.93e-24 | 22 |
liver primordium | 1.93e-24 | 22 |
digestive tract diverticulum | 2.07e-23 | 23 |
epithelial sac | 1.35e-21 | 25 |
epithelium of foregut-midgut junction | 1.35e-21 | 25 |
anatomical boundary | 1.35e-21 | 25 |
hepatobiliary system | 1.35e-21 | 25 |
foregut-midgut junction | 1.35e-21 | 25 |
septum transversum | 1.35e-21 | 25 |
sac | 8.56e-21 | 26 |
exocrine gland | 1.49e-17 | 31 |
exocrine system | 1.49e-17 | 31 |
endocrine gland | 1.27e-15 | 35 |
endocrine system | 2.74e-12 | 45 |
gut epithelium | 2.46e-10 | 54 |
abdomen element | 2.46e-10 | 54 |
abdominal segment element | 2.46e-10 | 54 |
gland | 1.66e-09 | 59 |
abdominal segment of trunk | 2.35e-09 | 60 |
abdomen | 2.35e-09 | 60 |
endo-epithelium | 5.63e-07 | 82 |