FFCP PHASE1:Hg19::chr20:4450781..4450802,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:4450781..4450802,-
|short_description=p@chr20:4450781..4450802,-
|description=CAGE_peak_at_chr20:4450781..4450802,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:4450781..4450802,- | |||
|coexpression_cluster_id=C2620 | |||
|description=CAGE_peak_at_chr20:4450781..4450802,- | |||
|id=chr20:4450781..4450802,- | |||
|ontology_enrichment_celltype=CL:0002620!1.39e-24!23;CL:0000057!6.83e-11!75;CL:0000055!4.03e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.67e-23;1!CL:0002372;3.67e-23;1!CL:0000243;2.02e-12;15!CL:0000125;2.02e-12;15!CL:0000095;3.48e-11;17!CL:0002319;4.70e-08;25!CL:0002321;8.58e-07;15!CL:0000056;8.85e-07;4!CL:0000737;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.62e-23,1;CL:0002372,2.62e-23,1;CL:0000243,2.06e-12,15;CL:0000125,2.06e-12,15;CL:0000030,2.06e-12,15;CL:0000339,2.06e-12,15;CL:0000095,3.55e-11,17;CL:0000123,3.55e-11,17;CL:0000333,1.31e-08,41;CL:0002319,4.76e-08,25;CL:0000737,8.14e-07,4;CL:0000515,8.14e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006238;8.40e-19;10!CL:0000339;2.02e-12;15!UBERON:0009847;1.26e-08;3!UBERON:0003353;1.26e-08;3!CL:0000515;8.85e-07;4 | |||
|ontology_enrichment_disease=DOID:171!9.00e-16!10;DOID:3093!2.26e-09!11;DOID:3095!3.40e-09!22;DOID:2994!3.40e-09!22;DOID:17!1.04e-08!5;DOID:450!1.04e-08!5;DOID:66!1.04e-08!5;DOID:423!1.04e-08!5;DOID:0080000!1.04e-08!5;DOID:11722!1.04e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3093;9.17e-30;11!DOID:3193;2.74e-12;2!DOID:962;2.74e-12;2!DOID:3307;2.74e-12;2!DOID:171;7.91e-10;10!DOID:3095;1.09e-09;22!DOID:2994;1.09e-09;22!DOID:1192;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.06e-29,11;DOID:3307,2.07e-12,2;DOID:3193,3.24e-12,2;DOID:962,3.24e-12,2;DOID:171,8.46e-10,10;DOID:3095,1.06e-09,22;DOID:2994,1.06e-09,22;DOID:1192,1.40e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.12e-15!45;UBERON:0002416!1.12e-15!45;UBERON:0002097!1.71e-15!40;UBERON:0003102!2.93e-13!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.74e-12;2!UBERON:0002346;6.87e-07;4!UBERON:0000923;6.87e-07;4!UBERON:0010316;6.87e-07;4!UBERON:0005291;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.24e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0,0,0.900273288253207,0.515262646192195,0.257640540045629,0.37223371266318,1.0126579934476,0.487185025805993,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,2.30126261887133,9.3838360225416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0.509197589862076,0.850299680406731,0.247871528518004,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27613733078862,0,0,0,0,0,0,0,0,0,0,0,1.33477682270483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0.538951212639521,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0,0,0.900273288253207,0.515262646192195,0.257640540045629,0.37223371266318,1.0126579934476,0.487185025805993,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,2.30126261887133,9.3838360225416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0.509197589862076,0.850299680406731,0.247871528518004,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27613733078862,0,0,0,0,0,0,0,0,0,0,0,1.33477682270483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p@chr20:4450781..4450802,- | |||
}} | }} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4450781..4450802, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4450781..4450802, - |
Coexpression cluster: | C2620_glioblastoma_peripheral_prostate_tridermal_neuroepithelioma_tubular_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.62e-23 | 1 |
myotube | 2.62e-23 | 1 |
glial cell (sensu Vertebrata) | 2.06e-12 | 15 |
glial cell | 2.06e-12 | 15 |
glioblast | 2.06e-12 | 15 |
glioblast (sensu Vertebrata) | 2.06e-12 | 15 |
neuron associated cell | 3.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 3.55e-11 | 17 |
migratory neural crest cell | 1.31e-08 | 41 |
neural cell | 4.76e-08 | 25 |
striated muscle cell | 8.14e-07 | 4 |
skeletal muscle myoblast | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.06e-29 | 11 |
teratoma | 2.07e-12 | 2 |
peripheral nerve sheath neoplasm | 3.24e-12 | 2 |
neurofibroma | 3.24e-12 | 2 |
neuroectodermal tumor | 8.46e-10 | 10 |
germ cell and embryonal cancer | 1.06e-09 | 22 |
germ cell cancer | 1.06e-09 | 22 |
peripheral nervous system neoplasm | 1.40e-08 | 3 |