FFCP PHASE1:Hg19::chr14:22975105..22975122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-289bp_to_uc001wfa.2_5end | |association_with_transcript=-289bp_to_uc001wfa.2_5end | ||
|cluster_id=chr14:22975105..22975122,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_2_at_uc001wfa.2_5end | |description=CAGE_peak_2_at_uc001wfa.2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000838!2.79e-35!52;CL:0000542!1.77e-34!53;CL:0000051!1.77e-34!53;CL:0000791!1.17e-26!18;CL:0000789!1.17e-26!18;CL:0002420!1.17e-26!18;CL:0002419!1.17e-26!18;CL:0000790!1.17e-26!18;CL:0000084!1.84e-21!25;CL:0000827!1.84e-21!25;CL:0000624!7.95e-19!6;CL:0002087!1.51e-17!119;CL:0000738!2.37e-17!140;CL:0002031!3.53e-15!124;CL:0000625!5.66e-13!11;CL:0000037!1.50e-12!172;CL:0000566!1.50e-12!172;CL:0000988!2.43e-12!182;CL:0002032!2.24e-11!165;CL:0000837!2.24e-11!165;CL:0000898!1.69e-10!3;CL:0000623!1.80e-10!3;CL:0000825!1.80e-10!3;CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000815!2.08e-07!2;CL:0000792!2.08e-07!2;CL:0002677!2.08e-07!2 | |ontology_enrichment_celltype=CL:0000838!2.79e-35!52;CL:0000542!1.77e-34!53;CL:0000051!1.77e-34!53;CL:0000791!1.17e-26!18;CL:0000789!1.17e-26!18;CL:0002420!1.17e-26!18;CL:0002419!1.17e-26!18;CL:0000790!1.17e-26!18;CL:0000084!1.84e-21!25;CL:0000827!1.84e-21!25;CL:0000624!7.95e-19!6;CL:0002087!1.51e-17!119;CL:0000738!2.37e-17!140;CL:0002031!3.53e-15!124;CL:0000625!5.66e-13!11;CL:0000037!1.50e-12!172;CL:0000566!1.50e-12!172;CL:0000988!2.43e-12!182;CL:0002032!2.24e-11!165;CL:0000837!2.24e-11!165;CL:0000898!1.69e-10!3;CL:0000623!1.80e-10!3;CL:0000825!1.80e-10!3;CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000815!2.08e-07!2;CL:0000792!2.08e-07!2;CL:0002677!2.08e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.73e-29;1!CL:0000786;2.73e-29;1!CL:0000945;1.97e-19;24!CL:0000623;1.04e-10;3 | |ontology_enrichment_celltype_v019=CL:0000946;2.73e-29;1!CL:0000786;2.73e-29;1!CL:0000945;1.97e-19;24!CL:0000623;1.04e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.37e-29,1;CL:0000786,2.37e-29,1;CL:0000980,2.37e-29,1;CL:0000945,1.92e-19,24;CL:0000826,1.92e-19,24;CL:0000785,2.05e-15,2;CL:0000955,2.05e-15,2;CL:0000818,2.05e-15,2;CL:0000954,2.05e-15,2;CL:0000816,2.05e-15,2;CL:0000838,5.23e-14,52;CL:0000542,9.46e-14,53;CL:0000051,9.46e-14,53;CL:0000623,8.99e-11,3;CL:0000825,8.99e-11,3;CL:0000817,9.90e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.21e-15;2 | |ontology_enrichment_development_v019=CL:0000954;2.21e-15;2 | ||
|ontology_enrichment_disease=DOID:0060058!6.58e-08!10 | |ontology_enrichment_disease=DOID:0060058!6.58e-08!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.11e-16!7;UBERON:0002106!1.16e-09!3;UBERON:0004854!1.16e-09!3;UBERON:0009034!1.16e-09!3;UBERON:0002095!1.16e-09!3;UBERON:0004782!1.16e-09!3;UBERON:0003281!1.16e-09!3;UBERON:0009664!1.16e-09!3;UBERON:0002296!1.16e-09!3;UBERON:0005602!1.16e-09!3;UBERON:0001179!1.16e-09!3;UBERON:0006293!1.16e-09!3;UBERON:0002370!4.05e-08!4;UBERON:0005058!4.05e-08!4;UBERON:0009113!4.05e-08!4;UBERON:0003295!4.05e-08!4;UBERON:0005562!4.05e-08!4 | |ontology_enrichment_uberon=UBERON:0004177!7.11e-16!7;UBERON:0002106!1.16e-09!3;UBERON:0004854!1.16e-09!3;UBERON:0009034!1.16e-09!3;UBERON:0002095!1.16e-09!3;UBERON:0004782!1.16e-09!3;UBERON:0003281!1.16e-09!3;UBERON:0009664!1.16e-09!3;UBERON:0002296!1.16e-09!3;UBERON:0005602!1.16e-09!3;UBERON:0001179!1.16e-09!3;UBERON:0006293!1.16e-09!3;UBERON:0002370!4.05e-08!4;UBERON:0005058!4.05e-08!4;UBERON:0009113!4.05e-08!4;UBERON:0003295!4.05e-08!4;UBERON:0005562!4.05e-08!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,2.62721886239826,3.46327437780189,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.668745981562712,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0,0,0,0.390178042679635,0.164437904603676,0.829050053357545,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.494411622680279,0.211125408127993,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.799529247399431,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.581300188524055,0.496597714366863,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,2.62721886239826,3.46327437780189,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.668745981562712,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0,0,0,0.390178042679635,0.164437904603676,0.829050053357545,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.494411622680279,0.211125408127993,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.799529247399431,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.581300188524055,0.496597714366863,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p2@uc001wfa.2 | |short_description=p2@uc001wfa.2 | ||
}} | }} |
Latest revision as of 19:14, 24 July 2015
Short description: | p2@uc001wfa.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001wfa.2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -289bp_to_uc001wfa.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.37e-29 | 1 |
plasma cell | 2.37e-29 | 1 |
plasmablast | 2.37e-29 | 1 |
lymphocyte of B lineage | 1.92e-19 | 24 |
pro-B cell | 1.92e-19 | 24 |
mature B cell | 2.05e-15 | 2 |
pre-B-II cell | 2.05e-15 | 2 |
transitional stage B cell | 2.05e-15 | 2 |
small pre-B-II cell | 2.05e-15 | 2 |
immature B cell | 2.05e-15 | 2 |
lymphoid lineage restricted progenitor cell | 5.23e-14 | 52 |
lymphocyte | 9.46e-14 | 53 |
common lymphoid progenitor | 9.46e-14 | 53 |
natural killer cell | 8.99e-11 | 3 |
pro-NK cell | 8.99e-11 | 3 |
precursor B cell | 9.90e-11 | 3 |