FFCP PHASE1:Hg19::chr1:159116916..159116923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9447 | |EntrezGene=9447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=357 | |HGNC=357 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T3V8 | |UniProt=Q5T3V8 | ||
|association_with_transcript=-30bp_to_ENST00000411768_5end | |association_with_transcript=-30bp_to_ENST00000411768_5end | ||
|cluster_id=chr1:159116916..159116923,- | |||
|coexpression_cluster_id=C111 | |coexpression_cluster_id=C111 | ||
|description=CAGE_peak_13_at_AIM2_5end | |description=CAGE_peak_13_at_AIM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.40e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.40e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@AIM2 | |short_description=p13@AIM2 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p13@AIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_AIM2_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -30bp_to_ENST00000411768_5end |
EntrezGene: | AIM2 |
HGNC: | 357 |
UniProt: | Q5T3V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
medulla oblongata | 6.76e-18 | 3 |
myelencephalon | 6.76e-18 | 3 |
future myelencephalon | 6.76e-18 | 3 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
brainstem | 1.22e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |