FFCP PHASE1:Hg19::chr10:95242030..95242041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26509 | |EntrezGene=26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3656 | |HGNC=3656 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J4,C9JCN0,Q9NZM1 | |UniProt=F8W8J4,C9JCN0,Q9NZM1 | ||
|association_with_transcript=32bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | |association_with_transcript=32bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | ||
|cluster_id=chr10:95242030..95242041,- | |||
|coexpression_cluster_id=C2080 | |coexpression_cluster_id=C2080 | ||
|description=CAGE_peak_6_at_MYOF_5end | |description=CAGE_peak_6_at_MYOF_5end | ||
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|ontology_enrichment_celltype=CL:0000076!2.35e-16!62;CL:0000222!8.73e-16!119;CL:0000220!3.83e-15!246;CL:0000055!4.98e-15!180;CL:0000066!6.18e-15!254;CL:0002321!1.98e-14!248;CL:0000057!2.10e-13!75;CL:0002139!9.22e-11!24;CL:0000213!1.30e-10!57;CL:0000215!1.30e-10!57;CL:0000071!3.68e-09!18;CL:0002546!3.68e-09!18;CL:0000548!1.53e-08!679;CL:0000004!1.53e-08!679;CL:0000255!1.53e-08!679;CL:0000012!7.26e-08!682;CL:0002620!1.55e-07!23;CL:0002078!4.43e-07!44 | |ontology_enrichment_celltype=CL:0000076!2.35e-16!62;CL:0000222!8.73e-16!119;CL:0000220!3.83e-15!246;CL:0000055!4.98e-15!180;CL:0000066!6.18e-15!254;CL:0002321!1.98e-14!248;CL:0000057!2.10e-13!75;CL:0002139!9.22e-11!24;CL:0000213!1.30e-10!57;CL:0000215!1.30e-10!57;CL:0000071!3.68e-09!18;CL:0002546!3.68e-09!18;CL:0000548!1.53e-08!679;CL:0000004!1.53e-08!679;CL:0000255!1.53e-08!679;CL:0000012!7.26e-08!682;CL:0002620!1.55e-07!23;CL:0002078!4.43e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.12e-11;24!CL:0000076;1.06e-09;63!CL:0000071;1.52e-09;18!CL:0002620;1.13e-07;23!CL:0000213;4.79e-07;58!CL:0000215;4.79e-07;58 | |ontology_enrichment_celltype_v019=CL:0002139;6.12e-11;24!CL:0000076;1.06e-09;63!CL:0000071;1.52e-09;18!CL:0002620;1.13e-07;23!CL:0000213;4.79e-07;58!CL:0000215;4.79e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000076,3.95e-18,63;CL:0000222,9.90e-16,121;CL:0002321,1.78e-14,250;CL:0000057,1.93e-14,76;CL:0000066,1.96e-14,253;CL:0000213,2.72e-11,58;CL:0000215,2.72e-11,58;CL:0002139,5.60e-11,24;CL:0000071,1.42e-09,18;CL:0002546,1.42e-09,18;CL:0002620,7.32e-08,23;CL:0002078,1.47e-07,45;CL:0000115,7.21e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.52e-09;18 | |ontology_enrichment_development_v019=CL:0002546;1.52e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.88e-14!659;UBERON:0002100!1.46e-13!216;UBERON:0002049!1.57e-13!79;UBERON:0007798!1.57e-13!79;UBERON:0003102!1.52e-12!95;UBERON:0000467!1.72e-12!625;UBERON:0000480!3.18e-12!626;UBERON:0000475!4.24e-12!365;UBERON:0000055!3.89e-11!69;UBERON:0003104!4.48e-11!238;UBERON:0009142!4.48e-11!238;UBERON:0001981!4.13e-10!60;UBERON:0007500!4.13e-10!60;UBERON:0004537!4.13e-10!60;UBERON:0006965!4.13e-10!60;UBERON:0000926!5.82e-10!448;UBERON:0004120!5.82e-10!448;UBERON:0006603!5.82e-10!448;UBERON:0005256!7.65e-10!143;UBERON:0004872!1.73e-09!84;UBERON:0000490!1.83e-09!138;UBERON:0000914!2.16e-09!83;UBERON:0002329!2.16e-09!83;UBERON:0003077!2.16e-09!83;UBERON:0003059!2.16e-09!83;UBERON:0007282!2.16e-09!83;UBERON:0009618!2.16e-09!83;UBERON:0007285!2.16e-09!83;UBERON:0001986!3.68e-09!18;UBERON:0004638!3.68e-09!18;UBERON:0004852!3.68e-09!18;UBERON:0000481!8.73e-09!347;UBERON:0003914!2.41e-08!118;UBERON:0004535!8.33e-08!110;UBERON:0001009!9.46e-08!113;UBERON:0000487!1.15e-07!22;UBERON:0000486!1.39e-07!82;UBERON:0002097!4.14e-07!40;UBERON:0006914!4.32e-07!25;UBERON:0004290!4.97e-07!70;UBERON:0000477!5.34e-07!286;UBERON:0002050!8.23e-07!605;UBERON:0005423!8.23e-07!605 | |ontology_enrichment_uberon=UBERON:0000468!1.88e-14!659;UBERON:0002100!1.46e-13!216;UBERON:0002049!1.57e-13!79;UBERON:0007798!1.57e-13!79;UBERON:0003102!1.52e-12!95;UBERON:0000467!1.72e-12!625;UBERON:0000480!3.18e-12!626;UBERON:0000475!4.24e-12!365;UBERON:0000055!3.89e-11!69;UBERON:0003104!4.48e-11!238;UBERON:0009142!4.48e-11!238;UBERON:0001981!4.13e-10!60;UBERON:0007500!4.13e-10!60;UBERON:0004537!4.13e-10!60;UBERON:0006965!4.13e-10!60;UBERON:0000926!5.82e-10!448;UBERON:0004120!5.82e-10!448;UBERON:0006603!5.82e-10!448;UBERON:0005256!7.65e-10!143;UBERON:0004872!1.73e-09!84;UBERON:0000490!1.83e-09!138;UBERON:0000914!2.16e-09!83;UBERON:0002329!2.16e-09!83;UBERON:0003077!2.16e-09!83;UBERON:0003059!2.16e-09!83;UBERON:0007282!2.16e-09!83;UBERON:0009618!2.16e-09!83;UBERON:0007285!2.16e-09!83;UBERON:0001986!3.68e-09!18;UBERON:0004638!3.68e-09!18;UBERON:0004852!3.68e-09!18;UBERON:0000481!8.73e-09!347;UBERON:0003914!2.41e-08!118;UBERON:0004535!8.33e-08!110;UBERON:0001009!9.46e-08!113;UBERON:0000487!1.15e-07!22;UBERON:0000486!1.39e-07!82;UBERON:0002097!4.14e-07!40;UBERON:0006914!4.32e-07!25;UBERON:0004290!4.97e-07!70;UBERON:0000477!5.34e-07!286;UBERON:0002050!8.23e-07!605;UBERON:0005423!8.23e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-09;18!UBERON:0001986;1.52e-09;18!UBERON:0004852;1.52e-09;18!UBERON:0000487;3.83e-08;22!UBERON:0006914;1.42e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-09;18!UBERON:0001986;1.52e-09;18!UBERON:0004852;1.52e-09;18!UBERON:0000487;3.83e-08;22!UBERON:0006914;1.42e-07;25 | ||
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| ||
|short_description=p6@MYOF | |short_description=p6@MYOF | ||
}} | }} |
Latest revision as of 01:27, 20 September 2015
Short description: | p6@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYOF_5end |
Coexpression cluster: | C2080_mucinous_Fibroblast_epithelioid_Preadipocyte_Olfactory_prostate_acantholytic |
Association with transcript: | 32bp_to_ENST00000371489, ENST00000371501, ENST00000371502, NM_013451, NM_133337, uc001kin.2, uc001kio.2, uc001kip.3, uc009xuf.2_5end |
EntrezGene: | MYOF |
HGNC: | 3656 |
UniProt: | F8W8J4C9JCN0Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.95e-18 | 63 |
mesodermal cell | 9.90e-16 | 121 |
embryonic cell | 1.78e-14 | 250 |
fibroblast | 1.93e-14 | 76 |
epithelial cell | 1.96e-14 | 253 |
lining cell | 2.72e-11 | 58 |
barrier cell | 2.72e-11 | 58 |
endothelial cell of vascular tree | 5.60e-11 | 24 |
blood vessel endothelial cell | 1.42e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.42e-09 | 18 |
skin fibroblast | 7.32e-08 | 23 |
meso-epithelial cell | 1.47e-07 | 45 |
endothelial cell | 7.21e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.17e-13 | 99 |
vasculature | 1.14e-12 | 78 |
vascular system | 1.14e-12 | 78 |
trunk | 1.14e-10 | 199 |
vessel | 2.59e-10 | 68 |
unilaminar epithelium | 3.99e-10 | 148 |
mesenchyme | 1.15e-09 | 160 |
entire embryonic mesenchyme | 1.15e-09 | 160 |
blood vessel endothelium | 1.42e-09 | 18 |
endothelium | 1.42e-09 | 18 |
cardiovascular system endothelium | 1.42e-09 | 18 |
epithelial tube open at both ends | 2.67e-09 | 59 |
blood vessel | 2.67e-09 | 59 |
blood vasculature | 2.67e-09 | 59 |
vascular cord | 2.67e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 1.77e-08 | 83 |
simple squamous epithelium | 3.90e-08 | 22 |
skin of body | 8.37e-08 | 41 |
epithelial tube | 1.09e-07 | 117 |
squamous epithelium | 1.22e-07 | 25 |
integument | 2.61e-07 | 46 |
integumental system | 2.61e-07 | 46 |
cardiovascular system | 3.01e-07 | 109 |
trunk mesenchyme | 3.19e-07 | 122 |
organ component layer | 3.43e-07 | 66 |
multilaminar epithelium | 5.10e-07 | 83 |
circulatory system | 6.36e-07 | 112 |