FFCP PHASE1:Hg19::chr9:130912628..130912633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130912628..130912633,+ | |||
|coexpression_cluster_id=C484 | |coexpression_cluster_id=C484 | ||
|description=CAGE_peak_at_chr9:130912628..130912633,+ | |description=CAGE_peak_at_chr9:130912628..130912633,+ | ||
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|ontology_enrichment_celltype=CL:0002076!7.17e-20!43;CL:0002149!1.90e-17!6;CL:0002255!1.90e-17!6;CL:0000223!3.44e-14!59;CL:1001319!2.20e-12!1;CL:1000600!2.20e-12!1;CL:0002368!3.89e-08!13 | |ontology_enrichment_celltype=CL:0002076!7.17e-20!43;CL:0002149!1.90e-17!6;CL:0002255!1.90e-17!6;CL:0000223!3.44e-14!59;CL:1001319!2.20e-12!1;CL:1000600!2.20e-12!1;CL:0002368!3.89e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.66e-23;3!CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | |ontology_enrichment_celltype_v019=CL:0002231;3.66e-23;3!CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.27e-23,3;CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6;CL:0002076,2.17e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.34e-08;10 | |ontology_enrichment_development_v019=UBERON:0005795;6.34e-08;10 | ||
|ontology_enrichment_disease=DOID:3001!1.90e-17!6;DOID:299!4.34e-11!25;DOID:305!3.42e-09!106;DOID:3493!6.07e-07!2 | |ontology_enrichment_disease=DOID:3001!1.90e-17!6;DOID:299!4.34e-11!25;DOID:305!3.42e-09!106;DOID:3493!6.07e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3001;2.59e-12;6 | |ontology_enrichment_disease_v019=DOID:3001;2.59e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0004645!2.20e-12!1;UBERON:0001256!2.20e-12!1;UBERON:0001259!2.20e-12!1;UBERON:0000995!1.07e-08!21;UBERON:0005795!2.62e-08!22;UBERON:0003975!2.62e-08!22;UBERON:0004175!2.48e-07!25;UBERON:0002294!2.77e-07!7;UBERON:0001173!2.77e-07!7;UBERON:0004912!2.77e-07!7;UBERON:0003126!3.45e-07!7;UBERON:0001005!3.45e-07!7;UBERON:0003127!6.80e-07!2;UBERON:0001255!8.06e-07!2;UBERON:0001556!8.06e-07!2 | |ontology_enrichment_uberon=UBERON:0004645!2.20e-12!1;UBERON:0001256!2.20e-12!1;UBERON:0001259!2.20e-12!1;UBERON:0000995!1.07e-08!21;UBERON:0005795!2.62e-08!22;UBERON:0003975!2.62e-08!22;UBERON:0004175!2.48e-07!25;UBERON:0002294!2.77e-07!7;UBERON:0001173!2.77e-07!7;UBERON:0004912!2.77e-07!7;UBERON:0003126!3.45e-07!7;UBERON:0001005!3.45e-07!7;UBERON:0003127!6.80e-07!2;UBERON:0001255!8.06e-07!2;UBERON:0001556!8.06e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
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|short_description=p@chr9:130912628..130912633,+ | |short_description=p@chr9:130912628..130912633,+ | ||
}} | }} |
Latest revision as of 23:07, 31 July 2015
Short description: | p@chr9:130912628..130912633, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130912628..130912633, + |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.27e-23 | 3 |
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
endo-epithelial cell | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.74e-12 | 6 |