FFCP PHASE1:Hg19::chr11:93479588..93479622,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28970 | |EntrezGene=28970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30204 | |HGNC=30204 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLB3 | |UniProt=E9PLB3 | ||
|association_with_transcript=-28bp_to_ENST00000526335_5end | |association_with_transcript=-28bp_to_ENST00000526335_5end | ||
|cluster_id=chr11:93479588..93479622,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_3_at_C11orf54_5end | |description=CAGE_peak_3_at_C11orf54_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.73e-14;1!UBERON:0005425;1.72e-13;1!UBERON:0004161;7.99e-11;11!UBERON:0003104;4.06e-10;31!UBERON:0009497;3.04e-09;13!UBERON:0007297;2.18e-07;2 | |ontology_enrichment_development_v019=UBERON:0006242;9.73e-14;1!UBERON:0005425;1.72e-13;1!UBERON:0004161;7.99e-11;11!UBERON:0003104;4.06e-10;31!UBERON:0009497;3.04e-09;13!UBERON:0007297;2.18e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;9.87e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;9.87e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!3.07e-08!55;UBERON:0005173!3.07e-08!55;UBERON:0002417!4.05e-07!61;UBERON:0000916!4.05e-07!61 | |ontology_enrichment_uberon=UBERON:0005172!3.07e-08!55;UBERON:0005173!3.07e-08!55;UBERON:0002417!4.05e-07!61;UBERON:0000916!4.05e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.72e-13;1!UBERON:0001301;1.72e-13;1!UBERON:0001785;1.72e-13;1!UBERON:0002464;1.72e-13;1!UBERON:0004904;1.72e-13;1!UBERON:0001021;1.72e-13;1!UBERON:0002423;1.97e-12;25!UBERON:0002107;8.68e-11;19!UBERON:0006925;8.68e-11;19!UBERON:0005172;9.96e-08;52!UBERON:0005173;9.96e-08;52!UBERON:0003714;2.18e-07;2!UBERON:0005162;2.18e-07;2!UBERON:0000122;2.18e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.72e-13;1!UBERON:0001301;1.72e-13;1!UBERON:0001785;1.72e-13;1!UBERON:0002464;1.72e-13;1!UBERON:0004904;1.72e-13;1!UBERON:0001021;1.72e-13;1!UBERON:0002423;1.97e-12;25!UBERON:0002107;8.68e-11;19!UBERON:0006925;8.68e-11;19!UBERON:0005172;9.96e-08;52!UBERON:0005173;9.96e-08;52!UBERON:0003714;2.18e-07;2!UBERON:0005162;2.18e-07;2!UBERON:0000122;2.18e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.37e-14,54;UBERON:0005173,5.37e-14,54;UBERON:0000941,1.61e-13,1;UBERON:0001785,1.61e-13,1;UBERON:0002464,1.61e-13,1;UBERON:0004904,1.61e-13,1;UBERON:0001021,1.61e-13,1;UBERON:0003902,1.61e-13,1;UBERON:0005425,1.61e-13,1;UBERON:0001301,1.83e-13,1;UBERON:0002417,1.62e-12,60;UBERON:0000916,1.62e-12,60;UBERON:0009497,1.97e-12,25;UBERON:0000015,1.97e-12,25;UBERON:0002423,1.97e-12,25;UBERON:0006235,1.97e-12,25;UBERON:0004161,1.97e-12,25;UBERON:0002107,8.68e-11,19;UBERON:0006925,8.68e-11,19;UBERON:0008836,8.68e-11,19;UBERON:0008835,2.39e-09,22;UBERON:0003894,2.39e-09,22;UBERON:0005177,5.90e-09,101;UBERON:0009854,5.97e-09,23;UBERON:0007499,2.99e-08,25;UBERON:0009569,5.69e-08,112;UBERON:0003929,5.89e-08,54;UBERON:0009856,6.11e-08,26;UBERON:0003714,2.12e-07,2;UBERON:0005162,2.12e-07,2;UBERON:0000122,2.12e-07,2;UBERON:0005911,8.35e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.9855207224405,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,22.8159062679296,0,4.13552934676983,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,17.7230540034082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,15.345439526615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.19351266257817,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,8.75157278431345,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,222.232094583739,33.6758455826688,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2845810998699,10.6005511129777,0,0,0,0,1.06787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,6.40603796469867,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,77.0521285887943,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733448665097199,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.9855207224405,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,22.8159062679296,0,4.13552934676983,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,17.7230540034082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,15.345439526615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.19351266257817,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,8.75157278431345,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,222.232094583739,33.6758455826688,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2845810998699,10.6005511129777,0,0,0,0,1.06787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,6.40603796469867,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,77.0521285887943,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733448665097199,0,0,0,0.320568492303233 | ||
|short_description=p3@C11orf54 | |short_description=p3@C11orf54 | ||
}} | }} |
Latest revision as of 03:01, 25 September 2015
Short description: | p3@C11orf54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C11orf54_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -28bp_to_ENST00000526335_5end |
EntrezGene: | C11orf54 |
HGNC: | 30204 |
UniProt: | E9PLB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 5.37e-14 | 54 |
abdominal segment element | 5.37e-14 | 54 |
cranial nerve II | 1.61e-13 | 1 |
cranial nerve | 1.61e-13 | 1 |
nerve trunk | 1.61e-13 | 1 |
nerve connecting eye with brain | 1.61e-13 | 1 |
nerve | 1.61e-13 | 1 |
retinal neural layer | 1.61e-13 | 1 |
presumptive neural retina | 1.61e-13 | 1 |
epididymis | 1.83e-13 | 1 |
abdominal segment of trunk | 1.62e-12 | 60 |
abdomen | 1.62e-12 | 60 |
epithelium of foregut-midgut junction | 1.97e-12 | 25 |
anatomical boundary | 1.97e-12 | 25 |
hepatobiliary system | 1.97e-12 | 25 |
foregut-midgut junction | 1.97e-12 | 25 |
septum transversum | 1.97e-12 | 25 |
liver | 8.68e-11 | 19 |
digestive gland | 8.68e-11 | 19 |
liver bud | 8.68e-11 | 19 |
hepatic diverticulum | 2.39e-09 | 22 |
liver primordium | 2.39e-09 | 22 |
trunk region element | 5.90e-09 | 101 |
digestive tract diverticulum | 5.97e-09 | 23 |
epithelial sac | 2.99e-08 | 25 |
subdivision of trunk | 5.69e-08 | 112 |
gut epithelium | 5.89e-08 | 54 |
sac | 6.11e-08 | 26 |
neural tissue | 2.12e-07 | 2 |
multi cell component structure | 2.12e-07 | 2 |
neuron projection bundle | 2.12e-07 | 2 |
endo-epithelium | 8.35e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.87e-08 | 2 |