FFCP PHASE1:Hg19::chr4:170611802..170611806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:170611802..170611806,+ | |||
|coexpression_cluster_id=C584 | |coexpression_cluster_id=C584 | ||
|description=CAGE_peak_at_chr4:170611802..170611806,+ | |description=CAGE_peak_at_chr4:170611802..170611806,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.37e-13;2!CL:0000558;1.37e-13;2!CL:0000632;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000764;1.37e-13;2!CL:0000558;1.37e-13;2!CL:0000632;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.21e-13,2;CL:0000765,1.21e-13,2;CL:0000050,1.21e-13,2;CL:0000038,1.21e-13,2;CL:0000558,1.21e-13,2;CL:0000547,1.21e-13,2;CL:0000549,1.21e-13,2;CL:0000550,1.21e-13,2;CL:0000552,1.21e-13,2;CL:0000632,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.51e-10!15;UBERON:0000179!3.51e-10!15;UBERON:0000463!3.51e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!3.51e-10!15;UBERON:0000179!3.51e-10!15;UBERON:0000463!3.51e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-59;15!UBERON:0000179;2.90e-59;15!UBERON:0000463;2.90e-59;15!UBERON:0002390;2.87e-26;32!UBERON:0002193;7.03e-14;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-59;15!UBERON:0000179;2.90e-59;15!UBERON:0000463;2.90e-59;15!UBERON:0002390;2.87e-26;32!UBERON:0002193;7.03e-14;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.20e-59,15;UBERON:0000179,3.20e-59,15;UBERON:0000463,3.20e-59,15;UBERON:0007023,1.10e-10,114;UBERON:0002390,3.88e-09,98;UBERON:0003061,3.88e-09,98;UBERON:0004535,2.66e-08,109;UBERON:0002193,2.66e-08,108;UBERON:0001009,4.44e-08,112 | |||
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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.387336002901508,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,5.07447609232169,3.0585488285695,0.569647187174163,5.00286728461357,3.70226045777575,1.29694662238543,3.24018862342869,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:170611802..170611806,+ | |short_description=p@chr4:170611802..170611806,+ | ||
}} | }} |
Latest revision as of 03:17, 30 July 2015
Short description: | p@chr4:170611802..170611806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:170611802..170611806, + |
Coexpression cluster: | C584_Whole_blood_Neutrophils_Reticulocytes_CD19_Burkitt_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.21e-13 | 2 |
erythroblast | 1.21e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.21e-13 | 2 |
erythroid progenitor cell | 1.21e-13 | 2 |
reticulocyte | 1.21e-13 | 2 |
proerythroblast | 1.21e-13 | 2 |
basophilic erythroblast | 1.21e-13 | 2 |
polychromatophilic erythroblast | 1.21e-13 | 2 |
orthochromatic erythroblast | 1.21e-13 | 2 |
hepatic stellate cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.20e-59 | 15 |
haemolymphatic fluid | 3.20e-59 | 15 |
organism substance | 3.20e-59 | 15 |
adult organism | 1.10e-10 | 114 |
hematopoietic system | 3.88e-09 | 98 |
blood island | 3.88e-09 | 98 |
cardiovascular system | 2.66e-08 | 109 |
hemolymphoid system | 2.66e-08 | 108 |
circulatory system | 4.44e-08 | 112 |