FFCP PHASE1:Hg19::chr9:116861343..116861349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113220 | |EntrezGene=113220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21495 | |HGNC=21495 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALC3,Q96FN5 | |UniProt=B1ALC3,Q96FN5 | ||
|association_with_transcript=-6bp_to_ENST00000374118,NM_138424,uc004bif.2_5end | |association_with_transcript=-6bp_to_ENST00000374118,NM_138424,uc004bif.2_5end | ||
|cluster_id=chr9:116861343..116861349,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_7_at_KIF12_5end | |description=CAGE_peak_7_at_KIF12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!2.00e-11!7;CL:0000586!2.00e-11!7;CL:0002541!4.59e-08!3 | |ontology_enrichment_celltype=CL:0000039!2.00e-11!7;CL:0000586!2.00e-11!7;CL:0002541!4.59e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.98e-34;3!CL:0002535;6.43e-14;2!CL:0000349;1.91e-12;19!CL:0002563;1.75e-07;4 | |ontology_enrichment_celltype_v019=CL:0002541;5.98e-34;3!CL:0002535;6.43e-14;2!CL:0000349;1.91e-12;19!CL:0002563;1.75e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.51e-34,3;CL:0002535,6.43e-14,2;CL:0000349,1.99e-12,19;CL:0002563,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!3.70e-11!2 | |ontology_enrichment_disease=DOID:4468!3.70e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.14e-13;2 | |ontology_enrichment_disease_v019=DOID:4468;1.14e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.99e-11!11;UBERON:0000160!2.43e-10!27;UBERON:0000473!5.34e-10!8;UBERON:0005409!9.73e-10!35;UBERON:0000476!4.59e-08!3;UBERON:0000920!4.59e-08!3;UBERON:0003101!1.94e-07!22;UBERON:0000079!1.94e-07!22;UBERON:0000059!1.97e-07!11;UBERON:0003124!3.19e-07!7 | |ontology_enrichment_uberon=UBERON:0003135!6.99e-11!11;UBERON:0000160!2.43e-10!27;UBERON:0000473!5.34e-10!8;UBERON:0005409!9.73e-10!35;UBERON:0000476!4.59e-08!3;UBERON:0000920!4.59e-08!3;UBERON:0003101!1.94e-07!22;UBERON:0000079!1.94e-07!22;UBERON:0000059!1.97e-07!11;UBERON:0003124!3.19e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.98e-34;3!UBERON:0000920;5.98e-34;3!UBERON:0005631;5.96e-23;10!UBERON:0000158;5.96e-23;10!UBERON:0006955;6.43e-14;2!UBERON:0004801;6.43e-14;2!UBERON:0000478;5.40e-10;24!UBERON:0001242;1.75e-07;4!UBERON:0001262;1.75e-07;4!UBERON:0004786;1.75e-07;4!UBERON:0004808;1.75e-07;4!UBERON:0001277;1.75e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;5.98e-34;3!UBERON:0000920;5.98e-34;3!UBERON:0005631;5.96e-23;10!UBERON:0000158;5.96e-23;10!UBERON:0006955;6.43e-14;2!UBERON:0004801;6.43e-14;2!UBERON:0000478;5.40e-10;24!UBERON:0001242;1.75e-07;4!UBERON:0001262;1.75e-07;4!UBERON:0004786;1.75e-07;4!UBERON:0004808;1.75e-07;4!UBERON:0001277;1.75e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.51e-34,3;UBERON:0005631,1.33e-16,14;UBERON:0000158,1.33e-16,14;UBERON:0003124,3.29e-15,7;UBERON:0006955,6.43e-14,2;UBERON:0004801,6.43e-14,2;UBERON:0000478,5.57e-10,24;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4 | |||
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|short_description=p7@KIF12 | |short_description=p7@KIF12 | ||
}} | }} |
Latest revision as of 07:48, 20 September 2015
Short description: | p7@KIF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KIF12_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -6bp_to_ENST00000374118, NM_138424, uc004bif.2_5end |
EntrezGene: | KIF12 |
HGNC: | 21495 |
UniProt: | B1ALC3Q96FN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.51e-34 | 3 |
epithelial cell of cervix | 6.43e-14 | 2 |
extraembryonic cell | 1.99e-12 | 19 |
intestinal epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.51e-34 | 3 |
extraembryonic membrane | 1.33e-16 | 14 |
membranous layer | 1.33e-16 | 14 |
chorion | 3.29e-15 | 7 |
uterine epithelium | 6.43e-14 | 2 |
cervix epithelium | 6.43e-14 | 2 |
extraembryonic structure | 5.57e-10 | 24 |
intestinal mucosa | 1.80e-07 | 4 |
wall of intestine | 1.80e-07 | 4 |
gastrointestinal system mucosa | 1.80e-07 | 4 |
gastrointestinal system epithelium | 1.80e-07 | 4 |
intestinal epithelium | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.55e-13 | 2 |