FFCP PHASE1:Hg19::chr12:114843940..114843955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=-51bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |association_with_transcript=-51bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | ||
|cluster_id=chr12:114843940..114843955,- | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_2_at_TBX5_5end | |description=CAGE_peak_2_at_TBX5_5end | ||
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|ontology_enrichment_celltype=CL:0002620!5.79e-22!23;CL:0000057!2.62e-10!75;CL:0000055!2.07e-08!180;CL:0002580!6.18e-07!3;CL:0002334!8.21e-07!12 | |ontology_enrichment_celltype=CL:0002620!5.79e-22!23;CL:0000057!2.62e-10!75;CL:0000055!2.07e-08!180;CL:0002580!6.18e-07!3;CL:0002334!8.21e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.20e-27;23!CL:0002580;1.98e-13;3!CL:0002598;3.75e-09;2!CL:0002617;8.10e-09;2!CL:0002600;8.10e-09;2 | |ontology_enrichment_celltype_v019=CL:0002620;2.20e-27;23!CL:0002580;1.98e-13;3!CL:0002598;3.75e-09;2!CL:0002617;8.10e-09;2!CL:0002600;8.10e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.86e-27,23;CL:0002580,2.24e-13,3;CL:0000057,1.02e-11,76;CL:0002598,2.43e-09,2;CL:0002617,8.61e-09,2;CL:0002600,9.33e-09,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.24e-10!5;DOID:450!3.24e-10!5;DOID:66!3.24e-10!5;DOID:423!3.24e-10!5;DOID:0080000!3.24e-10!5;DOID:11722!3.24e-10!5 | |ontology_enrichment_disease=DOID:17!3.24e-10!5;DOID:450!3.24e-10!5;DOID:66!3.24e-10!5;DOID:423!3.24e-10!5;DOID:0080000!3.24e-10!5;DOID:11722!3.24e-10!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.44e-20;5!DOID:450;2.44e-20;5!DOID:66;2.44e-20;5!DOID:423;2.44e-20;5!DOID:0080000;2.44e-20;5!DOID:11722;2.44e-20;5 | |ontology_enrichment_disease_v019=DOID:17;2.44e-20;5!DOID:450;2.44e-20;5!DOID:66;2.44e-20;5!DOID:423;2.44e-20;5!DOID:0080000;2.44e-20;5!DOID:11722;2.44e-20;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.44e-20,5;DOID:450,1.44e-20,5;DOID:66,1.44e-20,5;DOID:423,1.44e-20,5;DOID:0080000,1.44e-20,5;DOID:11722,1.44e-20,5 | |||
|ontology_enrichment_uberon=UBERON:0007100!6.97e-13!27;UBERON:0002097!1.41e-11!40;UBERON:0002199!5.91e-11!45;UBERON:0002416!5.91e-11!45;UBERON:0000948!1.73e-09!24;UBERON:0005498!1.73e-09!24;UBERON:0004140!1.73e-09!24;UBERON:0009881!1.73e-09!24;UBERON:0004141!1.73e-09!24;UBERON:0003084!1.73e-09!24;UBERON:0007005!1.73e-09!24;UBERON:0004139!1.73e-09!24;UBERON:0004291!1.73e-09!24;UBERON:0003103!1.72e-07!69 | |ontology_enrichment_uberon=UBERON:0007100!6.97e-13!27;UBERON:0002097!1.41e-11!40;UBERON:0002199!5.91e-11!45;UBERON:0002416!5.91e-11!45;UBERON:0000948!1.73e-09!24;UBERON:0005498!1.73e-09!24;UBERON:0004140!1.73e-09!24;UBERON:0009881!1.73e-09!24;UBERON:0004141!1.73e-09!24;UBERON:0003084!1.73e-09!24;UBERON:0007005!1.73e-09!24;UBERON:0004139!1.73e-09!24;UBERON:0004291!1.73e-09!24;UBERON:0003103!1.72e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.58e-10;41!UBERON:0000310;4.07e-10;10!UBERON:0001443;3.61e-09;11!UBERON:0002199;9.09e-09;46!UBERON:0002416;9.09e-09;46 | |ontology_enrichment_uberon_v019=UBERON:0002097;2.58e-10;41!UBERON:0000310;4.07e-10;10!UBERON:0001443;3.61e-09;11!UBERON:0002199;9.09e-09;46!UBERON:0002416;9.09e-09;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.10e-14,41;UBERON:0002199,2.87e-12,46;UBERON:0002416,2.87e-12,46;UBERON:0000310,4.45e-10,10;UBERON:0001443,3.92e-09,11;UBERON:0000915,8.06e-09,52 | |||
|phase1_expression=2.36181893051724,1.2846031433459,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,1.20538905604795,1.46062018077475,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0.221729397462564,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81680615617675,1.70845911054854,2.96704661623387,3.90118424909723,2.26715564324566,1.03056216018252,0.18611685633159,3.54430297706659,2.82567314967476,9.08761587278812,3.58994604704967,0,4.9701342952326,3.02256294682921,3.39121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,5.73431855489347,0.587403472388222,0.343143423810856,0,0,0,0,0,0,3.2254015016441,7.05925077125087,3.36792113319688,0,5.11707249066703,0,0,0.925258162815933,0,0.328508624055237,0,0.348631135379878,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,1.79128453917934,5.99114583247489,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,1.15755106853338,2.62357900818653,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33156700662011,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46851842035607,1.3749625440701,0,0.599037001496973,1.71690419254628,0.89268582976749,5.03876043650447,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20362237703084,20.1221510527572,3.72815149812476,0.992332043623902,0,0,0,0.544017803369474,1.2534494701135,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.701139929541673,0.554805861502613,0,0,0,0,0.453692771289717,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3684073756501,0,0,0.169732529954025,39.9640849791164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,1.48863353516788,46.6058797552995,0,0,0,0,0,5.23343983959569,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0.301925687133347,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0,0,0,0.573777643141411,0.99798106963804,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=2.36181893051724,1.2846031433459,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,1.20538905604795,1.46062018077475,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0.221729397462564,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81680615617675,1.70845911054854,2.96704661623387,3.90118424909723,2.26715564324566,1.03056216018252,0.18611685633159,3.54430297706659,2.82567314967476,9.08761587278812,3.58994604704967,0,4.9701342952326,3.02256294682921,3.39121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,5.73431855489347,0.587403472388222,0.343143423810856,0,0,0,0,0,0,3.2254015016441,7.05925077125087,3.36792113319688,0,5.11707249066703,0,0,0.925258162815933,0,0.328508624055237,0,0.348631135379878,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,1.79128453917934,5.99114583247489,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,1.15755106853338,2.62357900818653,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33156700662011,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46851842035607,1.3749625440701,0,0.599037001496973,1.71690419254628,0.89268582976749,5.03876043650447,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20362237703084,20.1221510527572,3.72815149812476,0.992332043623902,0,0,0,0.544017803369474,1.2534494701135,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.701139929541673,0.554805861502613,0,0,0,0,0.453692771289717,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3684073756501,0,0,0.169732529954025,39.9640849791164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,1.48863353516788,46.6058797552995,0,0,0,0,0,5.23343983959569,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0.301925687133347,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0,0,0,0.573777643141411,0.99798106963804,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@TBX5 | |short_description=p2@TBX5 | ||
}} | }} |
Latest revision as of 14:14, 16 September 2015
Short description: | p2@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX5_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -51bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.86e-27 | 23 |
preadipocyte of the breast | 2.24e-13 | 3 |
fibroblast | 1.02e-11 | 76 |
bronchial smooth muscle cell | 2.43e-09 | 2 |
adipocyte of breast | 8.61e-09 | 2 |
smooth muscle cell of trachea | 9.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.10e-14 | 41 |
integument | 2.87e-12 | 46 |
integumental system | 2.87e-12 | 46 |
breast | 4.45e-10 | 10 |
chest | 3.92e-09 | 11 |
thoracic segment of trunk | 8.06e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.44e-20 | 5 |
myotonic disease | 1.44e-20 | 5 |
muscle tissue disease | 1.44e-20 | 5 |
myopathy | 1.44e-20 | 5 |
muscular disease | 1.44e-20 | 5 |
myotonic dystrophy | 1.44e-20 | 5 |