FFCP PHASE1:Hg19::chr13:102344930..102344943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:102344930..102344943,+ | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_at_chr13:102344930..102344943,+ | |description=CAGE_peak_at_chr13:102344930..102344943,+ | ||
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|ontology_enrichment_celltype=CL:0000057!1.05e-26!75;CL:0000055!5.49e-18!180;CL:0002334!1.07e-15!12;CL:0002620!8.87e-09!23;CL:0000048!2.30e-07!430;CL:1000306!3.50e-07!4;CL:0002547!3.50e-07!4;CL:0002320!4.20e-07!365;CL:0000723!5.53e-07!436;CL:0000134!9.22e-07!358 | |ontology_enrichment_celltype=CL:0000057!1.05e-26!75;CL:0000055!5.49e-18!180;CL:0002334!1.07e-15!12;CL:0002620!8.87e-09!23;CL:0000048!2.30e-07!430;CL:1000306!3.50e-07!4;CL:0002547!3.50e-07!4;CL:0002320!4.20e-07!365;CL:0000723!5.53e-07!436;CL:0000134!9.22e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.18e-20;12!CL:0002579;9.13e-17;3!CL:0002580;2.30e-16;3!CL:0000135;3.58e-16;3!CL:0000388;3.58e-16;3!CL:0000197;4.91e-14;6!CL:0000098;4.91e-14;6!CL:0002167;4.91e-14;6!CL:0002617;3.42e-12;2!CL:0000136;2.81e-10;13!CL:0002615;4.77e-08;3!CL:0002616;9.38e-07;1 | |ontology_enrichment_celltype_v019=CL:0002334;1.18e-20;12!CL:0002579;9.13e-17;3!CL:0002580;2.30e-16;3!CL:0000135;3.58e-16;3!CL:0000388;3.58e-16;3!CL:0000197;4.91e-14;6!CL:0000098;4.91e-14;6!CL:0002167;4.91e-14;6!CL:0002617;3.42e-12;2!CL:0000136;2.81e-10;13!CL:0002615;4.77e-08;3!CL:0002616;9.38e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.29e-21,12;CL:0002580,8.05e-17,3;CL:0002579,8.49e-17,3;CL:0000135,1.23e-16,3;CL:0000388,1.23e-16,3;CL:0000197,3.89e-14,6;CL:0000098,3.89e-14,6;CL:0002167,3.89e-14,6;CL:0000057,3.20e-12,76;CL:0002617,3.35e-12,2;CL:0000136,5.89e-09,15;CL:0002615,3.43e-08,3;CL:0002616,8.21e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;9.38e-07;1 | |ontology_enrichment_disease_v019=DOID:3369;9.38e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,9.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.60e-08!6;UBERON:0002358!3.60e-08!6;UBERON:0003684!3.60e-08!6;UBERON:0001178!3.60e-08!6;UBERON:0003102!8.25e-08!95;UBERON:0002384!8.95e-08!375;UBERON:0000415!3.50e-07!4;UBERON:0007240!3.50e-07!4;UBERON:0005742!3.50e-07!4;UBERON:0005734!3.50e-07!4;UBERON:0004664!3.50e-07!4;UBERON:0004663!3.50e-07!4 | |ontology_enrichment_uberon=UBERON:0003688!3.60e-08!6;UBERON:0002358!3.60e-08!6;UBERON:0003684!3.60e-08!6;UBERON:0001178!3.60e-08!6;UBERON:0003102!8.25e-08!95;UBERON:0002384!8.95e-08!375;UBERON:0000415!3.50e-07!4;UBERON:0007240!3.50e-07!4;UBERON:0005742!3.50e-07!4;UBERON:0005734!3.50e-07!4;UBERON:0004664!3.50e-07!4;UBERON:0004663!3.50e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.53e-22;6!UBERON:0002358;3.53e-22;6!UBERON:0003684;3.53e-22;6!UBERON:0001178;3.53e-22;6!UBERON:0004457;1.05e-20;9!UBERON:0000042;1.05e-20;9!UBERON:0007846;3.58e-16;3!UBERON:0000043;3.58e-16;3!UBERON:0007845;3.58e-16;3!UBERON:0000310;2.80e-13;10!UBERON:0001443;4.77e-12;11!UBERON:0005406;1.75e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.53e-22;6!UBERON:0002358;3.53e-22;6!UBERON:0003684;3.53e-22;6!UBERON:0001178;3.53e-22;6!UBERON:0004457;1.05e-20;9!UBERON:0000042;1.05e-20;9!UBERON:0007846;3.58e-16;3!UBERON:0000043;3.58e-16;3!UBERON:0007845;3.58e-16;3!UBERON:0000310;2.80e-13;10!UBERON:0001443;4.77e-12;11!UBERON:0005406;1.75e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.20e-22,6;UBERON:0002358,2.20e-22,6;UBERON:0003684,2.20e-22,6;UBERON:0001178,2.20e-22,6;UBERON:0007846,1.23e-16,3;UBERON:0000043,1.23e-16,3;UBERON:0007845,1.23e-16,3;UBERON:0004457,1.67e-15,12;UBERON:0000042,1.67e-15,12;UBERON:0000310,1.66e-13,10;UBERON:0001443,2.98e-12,11;UBERON:0005406,1.15e-11,2 | |||
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| ||
|short_description=p@chr13:102344930..102344943,+ | |short_description=p@chr13:102344930..102344943,+ | ||
}} | }} |
Latest revision as of 14:15, 24 July 2015
Short description: | p@chr13:102344930..102344943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:102344930..102344943, + |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.29e-21 | 12 |
preadipocyte of the breast | 8.05e-17 | 3 |
omentum preadipocyte | 8.49e-17 | 3 |
fibrocyte | 1.23e-16 | 3 |
tendon cell | 1.23e-16 | 3 |
receptor cell | 3.89e-14 | 6 |
sensory epithelial cell | 3.89e-14 | 6 |
olfactory epithelial cell | 3.89e-14 | 6 |
fibroblast | 3.20e-12 | 76 |
adipocyte of breast | 3.35e-12 | 2 |
fat cell | 5.89e-09 | 15 |
adipocyte of omentum tissue | 3.43e-08 | 3 |
perirenal adipocyte cell | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.20e-22 | 6 |
peritoneum | 2.20e-22 | 6 |
abdominal cavity | 2.20e-22 | 6 |
visceral peritoneum | 2.20e-22 | 6 |
dense regular connective tissue | 1.23e-16 | 3 |
tendon | 1.23e-16 | 3 |
regular connective tissue | 1.23e-16 | 3 |
cavity lining | 1.67e-15 | 12 |
serous membrane | 1.67e-15 | 12 |
breast | 1.66e-13 | 10 |
chest | 2.98e-12 | 11 |
perirenal fat | 1.15e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 9.15e-07 | 1 |