FFCP PHASE1:Hg19::chr6:138428841..138428854,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64065 | |EntrezGene=64065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17637 | |HGNC=17637 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FX8 | |UniProt=Q96FX8 | ||
|association_with_transcript=-181bp_to_NM_022121,uc003qht.2_5end | |association_with_transcript=-181bp_to_NM_022121,uc003qht.2_5end | ||
|cluster_id=chr6:138428841..138428854,- | |||
|description=CAGE_peak_9_at_PERP_5end | |description=CAGE_peak_9_at_PERP_5end | ||
|id=chr6:138428841..138428854,- | |id=chr6:138428841..138428854,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;2.72e-10;2!CL:0002600;2.72e-10;2 | |ontology_enrichment_celltype_v019=CL:0002575;2.72e-10;2!CL:0002600;2.72e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.27e-10,2;CL:0002575,3.58e-10,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;9.81e-20;1!DOID:1357;9.81e-20;1!DOID:3371;1.56e-19;1!DOID:4549;1.56e-19;1!DOID:5861;1.56e-19;1!DOID:6496;1.56e-19;1!DOID:0060084;2.79e-07;3!DOID:127;2.79e-07;3 | |ontology_enrichment_disease_v019=DOID:0050619;9.81e-20;1!DOID:1357;9.81e-20;1!DOID:3371;1.56e-19;1!DOID:4549;1.56e-19;1!DOID:5861;1.56e-19;1!DOID:6496;1.56e-19;1!DOID:0060084;2.79e-07;3!DOID:127;2.79e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.95e-20,1;DOID:1357,8.95e-20,1;DOID:3371,1.56e-19,1;DOID:4549,1.56e-19,1;DOID:5861,1.56e-19,1;DOID:6496,1.56e-19,1;DOID:0060084,2.32e-07,3;DOID:127,2.32e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;9.81e-20;1!UBERON:0001825;9.81e-20;1!UBERON:0002418;2.19e-07;3!UBERON:0004755;2.19e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001764;9.81e-20;1!UBERON:0001825;9.81e-20;1!UBERON:0002418;2.19e-07;3!UBERON:0004755;2.19e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.95e-20,1;UBERON:0001825,8.95e-20,1;UBERON:0002418,2.19e-07,3;UBERON:0004755,2.19e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.756787138224657,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.548751427043128,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.725156697549733,0,0.184161977871793,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,1.11538995422883,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0.30607276163049,0,0.450970258243478,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.193978032976839,2.55942767405351,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.604651252380536,0,0,0,0,0.13480708770837,0,0,0,0,0.643012593860077,0.687697182986169,0.415440338029185,0,0,0.121499113316049,0.670869375198532,0,0.157363764404994,0,0.35857467866569,0,0,0,0,1.62899880526114,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,4.86867698375726,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0,0,0,0.419638523158333,0,0.127894371303652,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0.523813388962845,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,4.64965701472501,0,0.801711364730253,0.207216164163037,0.17071847709395,0,1.29068207646083,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0,3.72722070728568,0,0.452888530700021,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0.462175628631418,0,0.630832124175395,0,0,0.305966489225945,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.569822880276821,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.756787138224657,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.548751427043128,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.725156697549733,0,0.184161977871793,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,1.11538995422883,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0.30607276163049,0,0.450970258243478,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.193978032976839,2.55942767405351,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.604651252380536,0,0,0,0,0.13480708770837,0,0,0,0,0.643012593860077,0.687697182986169,0.415440338029185,0,0,0.121499113316049,0.670869375198532,0,0.157363764404994,0,0.35857467866569,0,0,0,0,1.62899880526114,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,4.86867698375726,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0,0,0,0.419638523158333,0,0.127894371303652,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0.523813388962845,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,4.64965701472501,0,0.801711364730253,0.207216164163037,0.17071847709395,0,1.29068207646083,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0.397901550322736,0,3.72722070728568,0,0.452888530700021,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0.462175628631418,0,0.630832124175395,0,0,0.305966489225945,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.569822880276821,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p9@PERP | |short_description=p9@PERP | ||
}} | }} |
Latest revision as of 04:41, 25 September 2015
Short description: | p9@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PERP_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_NM_022121, uc003qht.2_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | Q96FX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.27e-10 | 2 |
central nervous system pericyte | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.95e-20 | 1 |
paranasal sinus | 8.95e-20 | 1 |
cartilage tissue | 2.19e-07 | 3 |
skeletal tissue | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.95e-20 | 1 |
maxillary sinus cancer | 8.95e-20 | 1 |
chondrosarcoma | 1.56e-19 | 1 |
extraosseous chondrosarcoma | 1.56e-19 | 1 |
myxoid chondrosarcoma | 1.56e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 1.56e-19 | 1 |
cell type benign neoplasm | 2.32e-07 | 3 |
leiomyoma | 2.32e-07 | 3 |