FFCP PHASE1:Hg19::chr10:111683145..111683156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7511 | |EntrezGene=7511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12822 | |HGNC=12822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-288bp_to_ENST00000502895_5end | |association_with_transcript=-288bp_to_ENST00000502895_5end | ||
|cluster_id=chr10:111683145..111683156,- | |||
|description=CAGE_peak_2_at_XPNPEP1_5end | |description=CAGE_peak_2_at_XPNPEP1_5end | ||
|id=chr10:111683145..111683156,- | |id=chr10:111683145..111683156,- | ||
|ontology_enrichment_celltype=CL:0000359!9.31e-08!32;CL:0000738!6.52e-07!140 | |ontology_enrichment_celltype=CL:0000359!9.31e-08!32;CL:0000738!6.52e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-10;32!CL:0002393;6.76e-07;6!CL:0002397;6.76e-07;6 | |ontology_enrichment_celltype_v019=CL:0000359;1.21e-10;32!CL:0002393;6.76e-07;6!CL:0002397;6.76e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.64e-11,136;CL:0000048,7.51e-11,427;CL:0000359,8.78e-11,32;CL:0000723,1.67e-10,433;CL:0000034,4.27e-10,441;CL:0000988,2.17e-09,177;CL:0000037,2.90e-09,168;CL:0002393,7.18e-09,9;CL:0002397,7.18e-09,9;CL:0002031,1.77e-08,120;CL:0002320,3.88e-08,361;CL:0002032,8.05e-08,161;CL:0000837,8.05e-08,161;CL:0002087,1.01e-07,115;CL:0000134,3.93e-07,354;CL:0000192,5.99e-07,43;CL:0000514,5.99e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!4.55e-12!42;UBERON:0003509!4.55e-12!42;UBERON:0004572!4.55e-12!42;UBERON:0004573!7.70e-11!33;UBERON:0004571!7.70e-11!33;UBERON:0001981!3.22e-09!60;UBERON:0007500!3.22e-09!60;UBERON:0004537!3.22e-09!60;UBERON:0006965!3.22e-09!60;UBERON:0004872!4.80e-08!84;UBERON:0000055!9.31e-08!69 | |ontology_enrichment_uberon=UBERON:0001637!4.55e-12!42;UBERON:0003509!4.55e-12!42;UBERON:0004572!4.55e-12!42;UBERON:0004573!7.70e-11!33;UBERON:0004571!7.70e-11!33;UBERON:0001981!3.22e-09!60;UBERON:0007500!3.22e-09!60;UBERON:0004537!3.22e-09!60;UBERON:0006965!3.22e-09!60;UBERON:0004872!4.80e-08!84;UBERON:0000055!9.31e-08!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.05e-13;33!UBERON:0004571;2.05e-13;33!UBERON:0001637;3.94e-11;42!UBERON:0003509;3.94e-11;42!UBERON:0004572;3.94e-11;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.05e-13;33!UBERON:0004571;2.05e-13;33!UBERON:0001637;3.94e-11;42!UBERON:0003509;3.94e-11;42!UBERON:0004572;3.94e-11;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.58e-15,42;UBERON:0003509,2.58e-15,42;UBERON:0004572,2.58e-15,42;UBERON:0004573,3.18e-14,33;UBERON:0004571,3.18e-14,33;UBERON:0007500,1.43e-10,59;UBERON:0001981,1.43e-10,59;UBERON:0004537,1.43e-10,59;UBERON:0006965,1.43e-10,59;UBERON:0003081,4.06e-10,203;UBERON:0000055,4.89e-09,68;UBERON:0002204,1.20e-08,167;UBERON:0004872,1.00e-07,83;UBERON:0002384,1.66e-07,371 | |||
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| ||
|short_description=p2@XPNPEP1 | |short_description=p2@XPNPEP1 | ||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p2@XPNPEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XPNPEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -288bp_to_ENST00000502895_5end |
EntrezGene: | XPNPEP1 |
HGNC: | 12822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.64e-11 | 136 |
multi fate stem cell | 7.51e-11 | 427 |
vascular associated smooth muscle cell | 8.78e-11 | 32 |
somatic stem cell | 1.67e-10 | 433 |
stem cell | 4.27e-10 | 441 |
hematopoietic cell | 2.17e-09 | 177 |
hematopoietic stem cell | 2.90e-09 | 168 |
intermediate monocyte | 7.18e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.18e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 1.77e-08 | 120 |
connective tissue cell | 3.88e-08 | 361 |
hematopoietic oligopotent progenitor cell | 8.05e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.05e-08 | 161 |
nongranular leukocyte | 1.01e-07 | 115 |
mesenchymal cell | 3.93e-07 | 354 |
smooth muscle cell | 5.99e-07 | 43 |
smooth muscle myoblast | 5.99e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 2.58e-15 | 42 |
arterial blood vessel | 2.58e-15 | 42 |
arterial system | 2.58e-15 | 42 |
systemic artery | 3.18e-14 | 33 |
systemic arterial system | 3.18e-14 | 33 |
epithelial tube open at both ends | 1.43e-10 | 59 |
blood vessel | 1.43e-10 | 59 |
blood vasculature | 1.43e-10 | 59 |
vascular cord | 1.43e-10 | 59 |
lateral plate mesoderm | 4.06e-10 | 203 |
vessel | 4.89e-09 | 68 |
musculoskeletal system | 1.20e-08 | 167 |
splanchnic layer of lateral plate mesoderm | 1.00e-07 | 83 |
connective tissue | 1.66e-07 | 371 |