FFCP PHASE1:Hg19::chr11:5264740..5264781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4828 | |HGNC=4828 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000433329_5end | |association_with_transcript=0bp_to_ENST00000433329_5end | ||
|cluster_id=chr11:5264740..5264781,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_3_at_HBBP1_5end | |description=CAGE_peak_3_at_HBBP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!7.70e-21!2;CL:0000765!7.70e-21!2;CL:0000050!7.70e-21!2;CL:0000038!7.70e-21!2;CL:0000558!7.70e-21!2;CL:0000547!7.70e-21!2;CL:0000549!7.70e-21!2;CL:0000550!7.70e-21!2;CL:0000552!7.70e-21!2;CL:0002573!1.32e-13!2;CL:0000763!2.38e-12!112;CL:0000049!2.38e-12!112;CL:0002032!9.99e-08!165;CL:0000837!9.99e-08!165;CL:0000037!2.50e-07!172;CL:0000566!2.50e-07!172;CL:0000988!8.25e-07!182 | |ontology_enrichment_celltype=CL:0000764!7.70e-21!2;CL:0000765!7.70e-21!2;CL:0000050!7.70e-21!2;CL:0000038!7.70e-21!2;CL:0000558!7.70e-21!2;CL:0000547!7.70e-21!2;CL:0000549!7.70e-21!2;CL:0000550!7.70e-21!2;CL:0000552!7.70e-21!2;CL:0002573!1.32e-13!2;CL:0000763!2.38e-12!112;CL:0000049!2.38e-12!112;CL:0002032!9.99e-08!165;CL:0000837!9.99e-08!165;CL:0000037!2.50e-07!172;CL:0000566!2.50e-07!172;CL:0000988!8.25e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.35e-32;2!CL:0000558;3.35e-32;2!CL:0002573;6.70e-21;2!CL:0000763;9.42e-08;100 | |ontology_enrichment_celltype_v019=CL:0000764;3.35e-32;2!CL:0000558;3.35e-32;2!CL:0002573;6.70e-21;2!CL:0000763;9.42e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.35e-32,2;CL:0000765,3.35e-32,2;CL:0000050,3.35e-32,2;CL:0000038,3.35e-32,2;CL:0000558,3.35e-32,2;CL:0000547,3.35e-32,2;CL:0000549,3.35e-32,2;CL:0000550,3.35e-32,2;CL:0000552,3.35e-32,2;CL:0002573,7.42e-21,2;CL:0000763,4.95e-16,108;CL:0000049,4.95e-16,108;CL:0002032,1.92e-10,161;CL:0000837,1.92e-10,161;CL:0000037,5.78e-10,168;CL:0000988,2.10e-09,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!9.20e-43!8;DOID:8692!9.68e-36!31;DOID:1240!4.37e-28!39;DOID:2531!4.27e-21!51;DOID:0060083!4.27e-21!51;DOID:8552!3.08e-11!1;DOID:0050686!9.99e-07!137 | |ontology_enrichment_disease=DOID:1036!9.20e-43!8;DOID:8692!9.68e-36!31;DOID:1240!4.37e-28!39;DOID:2531!4.27e-21!51;DOID:0060083!4.27e-21!51;DOID:8552!3.08e-11!1;DOID:0050686!9.99e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.98e-47;8!DOID:8692;9.66e-38;31!DOID:1240;2.08e-23;39!DOID:8552;6.47e-17;1!DOID:2531;9.51e-16;51!DOID:0060083;9.51e-16;51 | |ontology_enrichment_disease_v019=DOID:1036;1.98e-47;8!DOID:8692;9.66e-38;31!DOID:1240;2.08e-23;39!DOID:8552;6.47e-17;1!DOID:2531;9.51e-16;51!DOID:0060083;9.51e-16;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.71e-47,8;DOID:8692,5.57e-39,31;DOID:1240,7.27e-31,39;DOID:2531,1.88e-23,51;DOID:0060083,1.88e-23,51;DOID:8552,6.47e-17,1;DOID:0050686,3.66e-08,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.33e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000010;1.33e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.38e-07,8 | |||
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|short_description=p3@HBBP1 | |short_description=p3@HBBP1 | ||
}} | }} |
Latest revision as of 07:44, 18 September 2015
Short description: | p3@HBBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HBBP1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000433329_5end |
EntrezGene: | NA |
HGNC: | 4828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.35e-32 | 2 |
erythroblast | 3.35e-32 | 2 |
megakaryocyte-erythroid progenitor cell | 3.35e-32 | 2 |
erythroid progenitor cell | 3.35e-32 | 2 |
reticulocyte | 3.35e-32 | 2 |
proerythroblast | 3.35e-32 | 2 |
basophilic erythroblast | 3.35e-32 | 2 |
polychromatophilic erythroblast | 3.35e-32 | 2 |
orthochromatic erythroblast | 3.35e-32 | 2 |
Schwann cell | 7.42e-21 | 2 |
myeloid cell | 4.95e-16 | 108 |
common myeloid progenitor | 4.95e-16 | 108 |
hematopoietic oligopotent progenitor cell | 1.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-10 | 161 |
hematopoietic stem cell | 5.78e-10 | 168 |
hematopoietic cell | 2.10e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.71e-47 | 8 |
myeloid leukemia | 5.57e-39 | 31 |
leukemia | 7.27e-31 | 39 |
hematologic cancer | 1.88e-23 | 51 |
immune system cancer | 1.88e-23 | 51 |
chronic myeloid leukemia | 6.47e-17 | 1 |
organ system cancer | 3.66e-08 | 137 |