FFCP PHASE1:Hg19::chr20:9147236..9147246,+: Difference between revisions
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|id=chr20:9147236..9147246,+
|short_description=p20@PLCB4
|description=CAGE_peak_20_at_PLCB4_5end
|association_with_transcript=231bp_to_ENST00000416836_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5332 | |EntrezGene=5332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9059 | |HGNC=9059 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJW1 | |UniProt=B1AJW1 | ||
|association_with_transcript=231bp_to_ENST00000416836_5end | |||
|cluster_id=chr20:9147236..9147246,+ | |||
|coexpression_cluster_id=C2626 | |||
|description=CAGE_peak_20_at_PLCB4_5end | |||
|id=chr20:9147236..9147246,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.49e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.48e-40;1!UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease=DOID:9119!7.98e-10!1;DOID:3112!1.84e-09!1;DOID:5662!3.25e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:9119;6.62e-41;1!DOID:169;7.25e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,6.62e-41,1;DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.26e-17!2;UBERON:0001155!2.43e-14!9;UBERON:0001044!4.09e-13!6;UBERON:0003293!4.09e-13!6;UBERON:0003294!4.09e-13!6;UBERON:0010047!4.09e-13!6;UBERON:0000167!4.09e-13!6;UBERON:0000059!9.03e-12!11;UBERON:0007023!4.72e-11!115;UBERON:0001831!9.44e-10!1;UBERON:0001567!9.44e-10!1;UBERON:0008801!9.44e-10!1;UBERON:0001736!1.32e-09!1;UBERON:0006298!1.32e-09!1;UBERON:0002079!1.43e-09!1;UBERON:0002135!2.55e-09!1;UBERON:0001154!2.77e-09!1;UBERON:0001153!2.77e-09!1;UBERON:0006834!3.83e-09!1;UBERON:0002372!4.87e-09!1;UBERON:0001961!4.87e-09!1;UBERON:0001744!4.87e-09!1;UBERON:0001735!4.87e-09!1;UBERON:0002581!5.28e-09!1;UBERON:0003408!4.62e-08!10;UBERON:0001007!1.49e-07!155;UBERON:0001555!1.49e-07!155;UBERON:0007026!1.49e-07!155;UBERON:0000078!1.86e-07!18;UBERON:0004907!2.51e-07!5;UBERON:0002046!2.85e-07!5;UBERON:0004117!2.85e-07!5;UBERON:0007689!2.85e-07!5;UBERON:0007123!2.85e-07!5;UBERON:0003091!2.85e-07!5;UBERON:0004921!8.09e-07!129;UBERON:0004185!8.09e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.48e-40;1!UBERON:0001567;1.48e-40;1!UBERON:0001044;2.72e-27;6!UBERON:0003293;2.72e-27;6!UBERON:0003294;2.72e-27;6!UBERON:0010047;2.72e-27;6!UBERON:0003408;2.72e-27;6!UBERON:0000167;2.72e-27;6!UBERON:0001829;4.66e-21;2!UBERON:0004089;4.66e-21;2!UBERON:0001041;2.37e-12;14!UBERON:0000161;2.26e-09;19!UBERON:0000166;2.26e-09;19!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0000013;3.49e-09;5!UBERON:0002410;3.49e-09;5!UBERON:0001456;1.42e-08;21!UBERON:0000153;3.72e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.48e-40,1;UBERON:0001567,1.48e-40,1;UBERON:0008801,1.48e-40,1;UBERON:0001044,2.38e-27,6;UBERON:0003293,2.38e-27,6;UBERON:0003294,2.38e-27,6;UBERON:0010047,2.38e-27,6;UBERON:0000167,2.38e-27,6;UBERON:0001829,4.66e-21,2;UBERON:0004089,4.66e-21,2;UBERON:0003408,6.93e-17,10;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0000166,3.04e-08,22;UBERON:0001456,3.27e-08,22;UBERON:0001444,4.43e-08,49;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000033,3.68e-07,56 | |||
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|short_description=p20@PLCB4 | |||
}} | }} |
Latest revision as of 17:02, 17 September 2015
Short description: | p20@PLCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PLCB4_5end |
Coexpression cluster: | C2626_retina_parotid_submaxillary_salivary_acute_papillary_neuroblastoma |
Association with transcript: | 231bp_to_ENST00000416836_5end |
EntrezGene: | PLCB4 |
HGNC: | 9059 |
UniProt: | B1AJW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.48e-40 | 1 |
cheek | 1.48e-40 | 1 |
parotid gland primordium | 1.48e-40 | 1 |
saliva-secreting gland | 2.38e-27 | 6 |
gland of oral region | 2.38e-27 | 6 |
gland of foregut | 2.38e-27 | 6 |
oral gland | 2.38e-27 | 6 |
oral cavity | 2.38e-27 | 6 |
major salivary gland | 4.66e-21 | 2 |
midface | 4.66e-21 | 2 |
gland of gut | 6.93e-17 | 10 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
oral opening | 3.04e-08 | 22 |
face | 3.27e-08 | 22 |
subdivision of head | 4.43e-08 | 49 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
head | 3.68e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.62e-41 | 1 |
neuroendocrine tumor | 7.25e-08 | 6 |