FFCP PHASE1:Hg19::chr10:5686954..5686963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5686954..5686963,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_at_chr10:5686954..5686963,- | |description=CAGE_peak_at_chr10:5686954..5686963,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002586!1.18e-17!3;CL:0000149!1.72e-13!4 | |ontology_enrichment_celltype=CL:0002586!1.18e-17!3;CL:0000149!1.72e-13!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | ||
|ontology_enrichment_disease=DOID:0050619!1.61e-13!1;DOID:1357!1.61e-13!1 | |ontology_enrichment_disease=DOID:0050619!1.61e-13!1;DOID:1357!1.61e-13!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!3.54e-40!5;UBERON:0005388!3.54e-40!5;UBERON:0001802!3.54e-40!5;UBERON:0001905!2.45e-26!2;UBERON:0002757!2.45e-26!2;UBERON:0010134!2.45e-26!2;UBERON:0002784!2.45e-26!2;UBERON:0005408!2.45e-26!2;UBERON:0001899!2.45e-26!2;UBERON:0001781!1.18e-17!3;UBERON:0001782!1.18e-17!3;UBERON:0005424!1.18e-17!3;UBERON:0000970!1.09e-15!20;UBERON:0002104!6.08e-15!21;UBERON:0003296!1.11e-13!4;UBERON:0010133!1.11e-13!4;UBERON:0000020!1.22e-13!23;UBERON:0001764!1.61e-13!1;UBERON:0001825!1.61e-13!1;UBERON:0001032!4.51e-13!24;UBERON:0004456!4.51e-13!24;UBERON:0000019!8.04e-11!19;UBERON:0000047!8.04e-11!19;UBERON:0004088!8.04e-11!19;UBERON:0003072!8.04e-11!19;UBERON:0003071!8.04e-11!19;UBERON:0004128!8.04e-11!19;UBERON:0001456!8.20e-10!21;UBERON:0005743!3.05e-08!86;UBERON:0001894!3.33e-08!7;UBERON:0006222!3.33e-08!7;UBERON:0000073!2.13e-07!94;UBERON:0001016!2.13e-07!94;UBERON:0005085!3.70e-07!29;UBERON:0000033!5.14e-07!123;UBERON:0003056!5.73e-07!61 | |ontology_enrichment_uberon=UBERON:0000966!3.54e-40!5;UBERON:0005388!3.54e-40!5;UBERON:0001802!3.54e-40!5;UBERON:0001905!2.45e-26!2;UBERON:0002757!2.45e-26!2;UBERON:0010134!2.45e-26!2;UBERON:0002784!2.45e-26!2;UBERON:0005408!2.45e-26!2;UBERON:0001899!2.45e-26!2;UBERON:0001781!1.18e-17!3;UBERON:0001782!1.18e-17!3;UBERON:0005424!1.18e-17!3;UBERON:0000970!1.09e-15!20;UBERON:0002104!6.08e-15!21;UBERON:0003296!1.11e-13!4;UBERON:0010133!1.11e-13!4;UBERON:0000020!1.22e-13!23;UBERON:0001764!1.61e-13!1;UBERON:0001825!1.61e-13!1;UBERON:0001032!4.51e-13!24;UBERON:0004456!4.51e-13!24;UBERON:0000019!8.04e-11!19;UBERON:0000047!8.04e-11!19;UBERON:0004088!8.04e-11!19;UBERON:0003072!8.04e-11!19;UBERON:0003071!8.04e-11!19;UBERON:0004128!8.04e-11!19;UBERON:0001456!8.20e-10!21;UBERON:0005743!3.05e-08!86;UBERON:0001894!3.33e-08!7;UBERON:0006222!3.33e-08!7;UBERON:0000073!2.13e-07!94;UBERON:0001016!2.13e-07!94;UBERON:0005085!3.70e-07!29;UBERON:0000033!5.14e-07!123;UBERON:0003056!5.73e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.49e-14;20!UBERON:0002104;1.05e-13;21!UBERON:0000020;1.29e-12;23!UBERON:0001032;3.86e-12;24!UBERON:0004456;3.86e-12;24!UBERON:0001894;9.43e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.49e-14;20!UBERON:0002104;1.05e-13;21!UBERON:0000020;1.29e-12;23!UBERON:0001032;3.86e-12;24!UBERON:0004456;3.86e-12;24!UBERON:0001894;9.43e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p@chr10:5686954..5686963,- | |short_description=p@chr10:5686954..5686963,- | ||
}} | }} |
Latest revision as of 14:14, 23 July 2015
Short description: | p@chr10:5686954..5686963, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5686954..5686963, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |