FFCP PHASE1:Hg19::chr11:61687750..61687761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5866 | |EntrezGene=5866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9780 | |HGNC=9780 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000301773,uc001nsp.2_5end | |association_with_transcript=-9bp_to_ENST00000301773,uc001nsp.2_5end | ||
|cluster_id=chr11:61687750..61687761,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_3_at_RAB3IL1_5end | |description=CAGE_peak_3_at_RAB3IL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!1.68e-07!2;CL:0000765!1.68e-07!2;CL:0000050!1.68e-07!2;CL:0000038!1.68e-07!2;CL:0000558!1.68e-07!2;CL:0000547!1.68e-07!2;CL:0000549!1.68e-07!2;CL:0000550!1.68e-07!2;CL:0000552!1.68e-07!2 | |ontology_enrichment_celltype=CL:0000764!1.68e-07!2;CL:0000765!1.68e-07!2;CL:0000050!1.68e-07!2;CL:0000038!1.68e-07!2;CL:0000558!1.68e-07!2;CL:0000547!1.68e-07!2;CL:0000549!1.68e-07!2;CL:0000550!1.68e-07!2;CL:0000552!1.68e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2 | |ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.34e-20,2;CL:0000765,5.34e-20,2;CL:0000050,5.34e-20,2;CL:0000038,5.34e-20,2;CL:0000558,5.34e-20,2;CL:0000547,5.34e-20,2;CL:0000549,5.34e-20,2;CL:0000550,5.34e-20,2;CL:0000552,5.34e-20,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!1.79e-09!8 | |ontology_enrichment_disease=DOID:1036!1.79e-09!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.83e-18;8!DOID:8552;3.45e-10;1!DOID:8692;2.00e-07;31 | |ontology_enrichment_disease_v019=DOID:1036;1.83e-18;8!DOID:8552;3.45e-10;1!DOID:8692;2.00e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-18,8;DOID:8552,2.50e-10,1;DOID:8692,3.35e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.83e-28!115;UBERON:0000178!4.56e-15!15;UBERON:0000179!4.56e-15!15;UBERON:0000463!4.56e-15!15 | |ontology_enrichment_uberon=UBERON:0007023!5.83e-28!115;UBERON:0000178!4.56e-15!15;UBERON:0000179!4.56e-15!15;UBERON:0000463!4.56e-15!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-29;15!UBERON:0000179;1.91e-29;15!UBERON:0000463;1.91e-29;15!UBERON:0002390;7.00e-17;32!UBERON:0002193;1.31e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-29;15!UBERON:0000179;1.91e-29;15!UBERON:0000463;1.91e-29;15!UBERON:0002390;7.00e-17;32!UBERON:0002193;1.31e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-29,15;UBERON:0000179,1.91e-29,15;UBERON:0000463,1.91e-29,15;UBERON:0007023,1.29e-09,114 | |||
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| ||
|short_description=p3@RAB3IL1 | |short_description=p3@RAB3IL1 | ||
}} | }} |
Latest revision as of 17:34, 18 September 2015
Short description: | p3@RAB3IL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB3IL1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -9bp_to_ENST00000301773, uc001nsp.2_5end |
EntrezGene: | RAB3IL1 |
HGNC: | 9780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.34e-20 | 2 |
erythroblast | 5.34e-20 | 2 |
megakaryocyte-erythroid progenitor cell | 5.34e-20 | 2 |
erythroid progenitor cell | 5.34e-20 | 2 |
reticulocyte | 5.34e-20 | 2 |
proerythroblast | 5.34e-20 | 2 |
basophilic erythroblast | 5.34e-20 | 2 |
polychromatophilic erythroblast | 5.34e-20 | 2 |
orthochromatic erythroblast | 5.34e-20 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.91e-29 | 15 |
haemolymphatic fluid | 1.91e-29 | 15 |
organism substance | 1.91e-29 | 15 |
adult organism | 1.29e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.83e-18 | 8 |
chronic myeloid leukemia | 2.50e-10 | 1 |
myeloid leukemia | 3.35e-07 | 31 |