FFCP PHASE1:Hg19::chr17:72931987..72931999,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347741 | |EntrezGene=347741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19658 | |HGNC=19658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_uc010wrq.1_5end | |association_with_transcript=173bp_to_uc010wrq.1_5end | ||
|cluster_id=chr17:72931987..72931999,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_OTOP3_5end | |description=CAGE_peak_2_at_OTOP3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002553!7.18e-09!1;CL:0000167!1.05e-08!1;CL:0000164!1.05e-08!1;CL:0000502!1.05e-08!1;CL:0000172!1.05e-08!1;CL:0000173!1.05e-08!1;CL:0002351!1.05e-08!1 | |ontology_enrichment_celltype=CL:0002553!7.18e-09!1;CL:0000167!1.05e-08!1;CL:0000164!1.05e-08!1;CL:0000502!1.05e-08!1;CL:0000172!1.05e-08!1;CL:0000173!1.05e-08!1;CL:0002351!1.05e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.89e-11;2 | |ontology_enrichment_celltype_v019=CL:0002535;3.89e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.09e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.98e-21;1!UBERON:0003056;7.50e-08;3 | |ontology_enrichment_development_v019=UBERON:0009143;6.98e-21;1!UBERON:0003056;7.50e-08;3 | ||
|ontology_enrichment_disease=DOID:3493!3.23e-15!2;DOID:4430!1.05e-08!1;DOID:4362!4.38e-07!5 | |ontology_enrichment_disease=DOID:3493!3.23e-15!2;DOID:4430!1.05e-08!1;DOID:4362!4.38e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;7.82e-17;5 | |ontology_enrichment_disease_v019=DOID:4362;7.82e-17;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,8.14e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0000002!6.58e-12!6;UBERON:0001560!6.58e-12!6;UBERON:0002372!8.36e-09!1;UBERON:0001961!8.36e-09!1;UBERON:0001744!8.36e-09!1;UBERON:0001735!8.36e-09!1;UBERON:0002108!2.10e-08!14;UBERON:0005409!4.03e-07!35 | |ontology_enrichment_uberon=UBERON:0000002!6.58e-12!6;UBERON:0001560!6.58e-12!6;UBERON:0002372!8.36e-09!1;UBERON:0001961!8.36e-09!1;UBERON:0001744!8.36e-09!1;UBERON:0001735!8.36e-09!1;UBERON:0002108!2.10e-08!14;UBERON:0005409!4.03e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.89e-36;4!UBERON:0000160;3.57e-18;17!UBERON:0005409;2.56e-14;22!UBERON:0000002;3.36e-14;6!UBERON:0001560;3.36e-14;6!UBERON:0004921;7.32e-13;33!UBERON:0000341;3.89e-11;2!UBERON:0006955;3.89e-11;2!UBERON:0004801;3.89e-11;2!UBERON:0002114;4.68e-08;2!UBERON:0001043;7.50e-08;3!UBERON:0001555;1.94e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.89e-36;4!UBERON:0000160;3.57e-18;17!UBERON:0005409;2.56e-14;22!UBERON:0000002;3.36e-14;6!UBERON:0001560;3.36e-14;6!UBERON:0004921;7.32e-13;33!UBERON:0000341;3.89e-11;2!UBERON:0006955;3.89e-11;2!UBERON:0004801;3.89e-11;2!UBERON:0002114;4.68e-08;2!UBERON:0001043;7.50e-08;3!UBERON:0001555;1.94e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.78e-36,4;UBERON:0000160,3.57e-18,17;UBERON:0000002,3.48e-14,6;UBERON:0001560,3.48e-14,6;UBERON:0005409,1.04e-12,25;UBERON:0000341,3.35e-11,2;UBERON:0006955,4.09e-11,2;UBERON:0004801,4.09e-11,2;UBERON:0002114,4.52e-08,2;UBERON:0001043,7.26e-08,3;UBERON:0009143,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0144757980097,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7109224980176,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,1.35784623083787,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,10.6500338188964,5.02686989159102,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7546978534004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0144757980097,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7109224980176,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,1.35784623083787,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,10.6500338188964,5.02686989159102,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7546978534004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@OTOP3 | |short_description=p2@OTOP3 | ||
}} | }} |
Latest revision as of 09:19, 17 September 2015
Short description: | p2@OTOP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTOP3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 173bp_to_uc010wrq.1_5end |
EntrezGene: | OTOP3 |
HGNC: | 19658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.78e-36 | 4 |
intestine | 3.57e-18 | 17 |
uterine cervix | 3.48e-14 | 6 |
neck of organ | 3.48e-14 | 6 |
gastrointestinal system | 1.04e-12 | 25 |
throat | 3.35e-11 | 2 |
uterine epithelium | 4.09e-11 | 2 |
cervix epithelium | 4.09e-11 | 2 |
duodenum | 4.52e-08 | 2 |
esophagus | 7.26e-08 | 3 |
esophageal region | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 8.14e-17 | 5 |