FFCP PHASE1:Hg19::chr16:67280824..67280836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:67280824..67280836,+ | |||
|description=CAGE_peak_at_chr16:67280824..67280836,+ | |description=CAGE_peak_at_chr16:67280824..67280836,+ | ||
|id=chr16:67280824..67280836,+ | |id=chr16:67280824..67280836,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.48e-10!254;CL:0002076!3.48e-09!43;CL:0000223!4.28e-09!59 | |ontology_enrichment_celltype=CL:0000066!4.48e-10!254;CL:0002076!3.48e-09!43;CL:0000223!4.28e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.07e-33;3!CL:0000771;6.43e-14;2!CL:0000322;1.47e-09;3!CL:0002327;1.40e-07;4 | |ontology_enrichment_celltype_v019=CL:0002541;1.07e-33;3!CL:0000771;6.43e-14;2!CL:0000322;1.47e-09;3!CL:0002327;1.40e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.51e-34,3;CL:0000771,6.43e-14,2;CL:0000322,1.81e-09,3;CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;6.72e-26;1!UBERON:0007297;1.14e-13;2!UBERON:0001041;4.38e-08;30 | |ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;6.72e-26;1!UBERON:0007297;1.14e-13;2!UBERON:0001041;4.38e-08;30 | ||
|ontology_enrichment_disease=DOID:305!5.14e-18!106;DOID:0050687!1.86e-13!143;DOID:1749!4.41e-13!14;DOID:299!6.81e-10!25;DOID:3119!2.89e-07!14 | |ontology_enrichment_disease=DOID:305!5.14e-18!106;DOID:0050687!1.86e-13!143;DOID:1749!4.41e-13!14;DOID:299!6.81e-10!25;DOID:3119!2.89e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.14e-13;2!DOID:5093;1.40e-07;4!DOID:1612;1.40e-07;4!DOID:1324;1.49e-07;15!DOID:0050615;3.90e-07;16 | |ontology_enrichment_disease_v019=DOID:3910;1.14e-13;2!DOID:5093;1.40e-07;4!DOID:1612;1.40e-07;4!DOID:1324;1.49e-07;15!DOID:0050615;3.90e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.55e-13,2;DOID:5093,1.40e-07,4;DOID:1612,1.40e-07,4;DOID:1324,1.59e-07,15;DOID:0050615,4.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0005153!1.71e-08!37;UBERON:0005911!2.52e-08!82;UBERON:0002048!1.05e-07!22;UBERON:0000117!1.05e-07!22;UBERON:0000171!1.05e-07!22;UBERON:0000170!1.05e-07!22;UBERON:0005597!1.05e-07!22;UBERON:0000118!1.05e-07!22;UBERON:0005631!2.87e-07!14;UBERON:0000158!2.87e-07!14;UBERON:0000485!4.63e-07!9;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3 | |ontology_enrichment_uberon=UBERON:0005153!1.71e-08!37;UBERON:0005911!2.52e-08!82;UBERON:0002048!1.05e-07!22;UBERON:0000117!1.05e-07!22;UBERON:0000171!1.05e-07!22;UBERON:0000170!1.05e-07!22;UBERON:0005597!1.05e-07!22;UBERON:0000118!1.05e-07!22;UBERON:0005631!2.87e-07!14;UBERON:0000158!2.87e-07!14;UBERON:0000485!4.63e-07!9;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.07e-33;3!UBERON:0000920;1.07e-33;3!UBERON:0000998;6.72e-26;1!UBERON:0006868;6.72e-26;1!UBERON:0004903;1.14e-13;2!UBERON:0002173;1.14e-13;2!UBERON:0002186;1.14e-13;2!UBERON:0000058;7.29e-11;10!UBERON:0005631;7.29e-11;10!UBERON:0000158;7.29e-11;10!UBERON:0004821;1.47e-09;3!UBERON:0007499;1.47e-09;3!UBERON:0003215;1.47e-09;3!UBERON:0010368;1.47e-09;3!UBERON:0009911;1.47e-09;3!UBERON:0002299;1.47e-09;3!UBERON:0006947;1.47e-09;3!UBERON:0006524;1.47e-09;3!UBERON:0008874;1.47e-09;3!UBERON:0002169;1.47e-09;3!UBERON:0004894;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.75e-07;4!UBERON:0009856;1.75e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.07e-33;3!UBERON:0000920;1.07e-33;3!UBERON:0000998;6.72e-26;1!UBERON:0006868;6.72e-26;1!UBERON:0004903;1.14e-13;2!UBERON:0002173;1.14e-13;2!UBERON:0002186;1.14e-13;2!UBERON:0000058;7.29e-11;10!UBERON:0005631;7.29e-11;10!UBERON:0000158;7.29e-11;10!UBERON:0004821;1.47e-09;3!UBERON:0007499;1.47e-09;3!UBERON:0003215;1.47e-09;3!UBERON:0010368;1.47e-09;3!UBERON:0009911;1.47e-09;3!UBERON:0002299;1.47e-09;3!UBERON:0006947;1.47e-09;3!UBERON:0006524;1.47e-09;3!UBERON:0008874;1.47e-09;3!UBERON:0002169;1.47e-09;3!UBERON:0004894;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.75e-07;4!UBERON:0009856;1.75e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.51e-34,3;UBERON:0000998,7.62e-26,1;UBERON:0006868,7.62e-26,1;UBERON:0003124,3.29e-15,7;UBERON:0004903,1.55e-13,2;UBERON:0002173,1.55e-13,2;UBERON:0002186,1.55e-13,2;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0004821,1.81e-09,3;UBERON:0003215,1.81e-09,3;UBERON:0010368,1.81e-09,3;UBERON:0009911,1.81e-09,3;UBERON:0002299,1.81e-09,3;UBERON:0006524,1.81e-09,3;UBERON:0008874,1.81e-09,3;UBERON:0002169,1.81e-09,3;UBERON:0004894,1.81e-09,3;UBERON:0005631,4.34e-08,14;UBERON:0000158,4.34e-08,14;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4;UBERON:0005904,1.80e-07,4 | |||
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| ||
|short_description=p@chr16:67280824..67280836,+ | |short_description=p@chr16:67280824..67280836,+ | ||
}} | }} |
Latest revision as of 11:19, 25 July 2015
Short description: | p@chr16:67280824..67280836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67280824..67280836, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.51e-34 | 3 |
eosinophil | 6.43e-14 | 2 |
pneumocyte | 1.81e-09 | 3 |
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.51e-34 | 3 |
seminal vesicle | 7.62e-26 | 1 |
seminal fluid secreting gland | 7.62e-26 | 1 |
chorion | 3.29e-15 | 7 |
bronchoalveolar duct junction | 1.55e-13 | 2 |
alveolar duct | 1.55e-13 | 2 |
bronchiole | 1.55e-13 | 2 |
male genital duct | 1.54e-09 | 3 |
internal male genitalia | 1.54e-09 | 3 |
pulmonary alveolus epithelium | 1.81e-09 | 3 |
alveolus | 1.81e-09 | 3 |
pulmonary lobule | 1.81e-09 | 3 |
lobule | 1.81e-09 | 3 |
alveolus of lung | 1.81e-09 | 3 |
alveolar system | 1.81e-09 | 3 |
pulmonary acinus | 1.81e-09 | 3 |
alveolar sac | 1.81e-09 | 3 |
alveolar wall | 1.81e-09 | 3 |
extraembryonic membrane | 4.34e-08 | 14 |
membranous layer | 4.34e-08 | 14 |
mammary gland | 1.40e-07 | 4 |
mammary bud | 1.40e-07 | 4 |
mammary ridge | 1.40e-07 | 4 |
mammary placode | 1.40e-07 | 4 |
duct of male reproductive system | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.55e-13 | 2 |
thoracic cancer | 1.40e-07 | 4 |
breast cancer | 1.40e-07 | 4 |
lung cancer | 1.59e-07 | 15 |
respiratory system cancer | 4.14e-07 | 16 |