FFCP PHASE1:Hg19::chr1:62784864..62784917,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163782 | |EntrezGene=163782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27263 | |HGNC=27263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000354381_5end | |association_with_transcript=54bp_to_ENST00000354381_5end | ||
|cluster_id=chr1:62784864..62784917,- | |||
|coexpression_cluster_id=C3990 | |coexpression_cluster_id=C3990 | ||
|description=CAGE_peak_2_at_KANK4_5end | |description=CAGE_peak_2_at_KANK4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.95e-11;19!CL:0002541;6.56e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;7.95e-11;19!CL:0002541;6.56e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.06e-11,19;CL:0002541,5.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.94e-07;3!UBERON:0003057;3.94e-07;3 | |ontology_enrichment_development_v019=UBERON:0006241;3.94e-07;3!UBERON:0003057;3.94e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;3.67e-13;6!UBERON:0005631;1.16e-12;10!UBERON:0000158;1.16e-12;10!UBERON:0000478;1.49e-09;24!UBERON:0002784;3.33e-08;4!UBERON:0000305;1.03e-07;7!UBERON:0001987;1.05e-07;4!UBERON:0004732;1.63e-07;13!UBERON:0000988;1.99e-07;3!UBERON:0001896;2.16e-07;3!UBERON:0005290;2.16e-07;3!UBERON:0002240;3.94e-07;3!UBERON:0005174;3.94e-07;3!UBERON:0001137;3.94e-07;3!UBERON:0001894;5.78e-07;7!UBERON:0003124;6.56e-07;3!UBERON:0000920;6.56e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002298;3.67e-13;6!UBERON:0005631;1.16e-12;10!UBERON:0000158;1.16e-12;10!UBERON:0000478;1.49e-09;24!UBERON:0002784;3.33e-08;4!UBERON:0000305;1.03e-07;7!UBERON:0001987;1.05e-07;4!UBERON:0004732;1.63e-07;13!UBERON:0000988;1.99e-07;3!UBERON:0001896;2.16e-07;3!UBERON:0005290;2.16e-07;3!UBERON:0002240;3.94e-07;3!UBERON:0005174;3.94e-07;3!UBERON:0001137;3.94e-07;3!UBERON:0001894;5.78e-07;7!UBERON:0003124;6.56e-07;3!UBERON:0000920;6.56e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.07e-18,14;UBERON:0000158,1.07e-18,14;UBERON:0001049,1.23e-13,56;UBERON:0005068,1.23e-13,56;UBERON:0006241,1.23e-13,56;UBERON:0007135,1.23e-13,56;UBERON:0002298,3.34e-13,6;UBERON:0003124,5.13e-13,7;UBERON:0007023,9.21e-13,114;UBERON:0000073,1.45e-10,53;UBERON:0002616,1.45e-10,53;UBERON:0003076,2.53e-10,15;UBERON:0003057,2.53e-10,15;UBERON:0010371,2.98e-10,104;UBERON:0003075,5.34e-10,82;UBERON:0007284,5.34e-10,82;UBERON:0004121,9.37e-10,171;UBERON:0000924,9.37e-10,171;UBERON:0006601,9.37e-10,171;UBERON:0000478,1.37e-09,24;UBERON:0002346,3.26e-09,86;UBERON:0001016,4.65e-09,89;UBERON:0001017,6.32e-09,81;UBERON:0011216,1.26e-08,223;UBERON:0002784,3.16e-08,4;UBERON:0000955,9.72e-08,68;UBERON:0006238,9.72e-08,68;UBERON:0000305,1.01e-07,7;UBERON:0001987,1.06e-07,4;UBERON:0004340,1.06e-07,4;UBERON:0004732,1.56e-07,13;UBERON:0000988,1.87e-07,3;UBERON:0001896,2.08e-07,3;UBERON:0005290,2.08e-07,3;UBERON:0010096,2.08e-07,3;UBERON:0002240,3.54e-07,3;UBERON:0005174,3.54e-07,3;UBERON:0001137,3.54e-07,3;UBERON:0001894,5.26e-07,7;UBERON:0006222,5.26e-07,7;UBERON:0000920,5.50e-07,3 | |||
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| ||
|short_description=p2@KANK4 | |short_description=p2@KANK4 | ||
}} | }} |
Latest revision as of 19:50, 18 September 2015
Short description: | p2@KANK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KANK4_5end |
Coexpression cluster: | C3990_Wilms_choriocarcinoma_chorionic_mature_Amniotic_amniotic_optic |
Association with transcript: | 54bp_to_ENST00000354381_5end |
EntrezGene: | KANK4 |
HGNC: | 27263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.06e-11 | 19 |
chorionic membrane mesenchymal stem cell | 5.50e-07 | 3 |