FFCP PHASE1:Hg19::chr12:122241012..122241023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122241012..122241023,+ | |||
|description=CAGE_peak_at_chr12:122241012..122241023,+ | |description=CAGE_peak_at_chr12:122241012..122241023,+ | ||
|id=chr12:122241012..122241023,+ | |id=chr12:122241012..122241023,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.41e-18;2!CL:0000792;2.41e-18;2!CL:0002677;2.41e-18;2!CL:0000624;1.28e-13;6!CL:0000898;1.49e-12;3!CL:0000228;4.84e-10;1!CL:0002372;4.84e-10;1!CL:0000084;1.48e-08;25!CL:0000791;6.35e-08;18!CL:0000789;6.35e-08;18!CL:0002419;6.35e-08;18 | |ontology_enrichment_celltype_v019=CL:0000815;2.41e-18;2!CL:0000792;2.41e-18;2!CL:0002677;2.41e-18;2!CL:0000624;1.28e-13;6!CL:0000898;1.49e-12;3!CL:0000228;4.84e-10;1!CL:0002372;4.84e-10;1!CL:0000084;1.48e-08;25!CL:0000791;6.35e-08;18!CL:0000789;6.35e-08;18!CL:0002419;6.35e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,7.03e-19,2;CL:0000792,7.03e-19,2;CL:0002677,7.03e-19,2;CL:0000624,5.15e-14,6;CL:0000898,6.58e-13,3;CL:0000228,3.71e-10,1;CL:0002372,3.71e-10,1;CL:0000084,1.32e-08,25;CL:0000827,1.32e-08,25;CL:0000791,4.82e-08,18;CL:0000789,4.82e-08,18;CL:0002420,4.82e-08,18;CL:0002419,4.82e-08,18;CL:0000790,4.82e-08,18 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.84e-10;1!CL:0000790;6.35e-08;18 | |ontology_enrichment_development_v019=UBERON:0010227;4.84e-10;1!CL:0000790;6.35e-08;18 | ||
|ontology_enrichment_disease=DOID:0050687!2.21e-08!143;DOID:305!2.98e-08!106 | |ontology_enrichment_disease=DOID:0050687!2.21e-08!143;DOID:305!2.98e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.84e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0002079;4.84e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.40e-10,1 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0,0,0.164201178899891,0.157421562627358,0.393364276848904,0,0.309632246632152,0.919421224478927,1.204823675113,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.57204305099666,0.616804496998528,0.501559486172034,1.95553359980154,0.473447805734733,0,0,1.47302953737419,0.221533894583621,0.270803863765016,1.15282187753108,0.780356085359269,0.164437904603676,0.552700035571697,0.289803085735052,0.593146252648242,0.802622484269139,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.403213486449465,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0.71181185733329,0.808987848960987,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0.224170287987055,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0.320472213382419,0,0,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0.606802608747567,0.445773537109913,0,0,0.296964680832639,0,0,0,0.111308705022906,0,1.05562704063997,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,1.99613798001194,0.260427761085233,0.787139999965761,0,0.1137934482855,0.254253650292766,0,0,0,0.520874984799877,0,0.120596438625408,0,0.663475559587348,0,0.219385397153973,0,0.278847488557207,0,0.113942055847001,0.23056390438806,0.269272933229316,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0.569261198172555,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0,0,0.802577647298789,0.468528891450678,0.364909578431332,0.19566461893209,0,0.789168805698781,1.20990716048664,0,0.252746318513952,0,0,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.195984794828755,0,0,0.171986032471617,0.290268993867255,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0,0.195551382734803,0.160317640503067,0,0.19980960958213,0.144090417154106,0.114536596165916,0.171594997861965,0,0.248505071130865,0.235694034616795,0.135904206073614,0,0,0,0,0.410716136675979,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0,0.803765742325096,0.825236619583403,1.66176135211674,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,1.19730191562487,0,0.851940108927109,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,0,0,0.124192805882767,0,0,0,0.285465333544967,0,1.40500471742064,0.724605143054126,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.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| ||
|short_description=p@chr12:122241012..122241023,+ | |short_description=p@chr12:122241012..122241023,+ | ||
}} | }} |
Latest revision as of 06:00, 24 July 2015
Short description: | p@chr12:122241012..122241023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122241012..122241023, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 7.03e-19 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.03e-19 | 2 |
naive regulatory T cell | 7.03e-19 | 2 |
CD4-positive, alpha-beta T cell | 5.15e-14 | 6 |
naive T cell | 6.58e-13 | 3 |
multinucleate cell | 3.71e-10 | 1 |
myotube | 3.71e-10 | 1 |
T cell | 1.32e-08 | 25 |
pro-T cell | 1.32e-08 | 25 |
mature alpha-beta T cell | 4.82e-08 | 18 |
alpha-beta T cell | 4.82e-08 | 18 |
immature T cell | 4.82e-08 | 18 |
mature T cell | 4.82e-08 | 18 |
immature alpha-beta T cell | 4.82e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.40e-10 | 1 |