FFCP PHASE1:Hg19::chr1:8484142..8484232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000465125_5end | |association_with_transcript=61bp_to_ENST00000465125_5end | ||
|cluster_id=chr1:8484142..8484232,- | |||
|description=CAGE_peak_10_at_RERE_5end | |description=CAGE_peak_10_at_RERE_5end | ||
|id=chr1:8484142..8484232,- | |id=chr1:8484142..8484232,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0001009!7.24e-08!113;UBERON:0000479!1.48e-07!787;UBERON:0004535!4.33e-07!110;UBERON:0003081!5.24e-07!216 | |ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0001009!7.24e-08!113;UBERON:0000479!1.48e-07!787;UBERON:0004535!4.33e-07!110;UBERON:0003081!5.24e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002193;6.02e-07;42!UBERON:0002390;7.84e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002193;6.02e-07;42!UBERON:0002390;7.84e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.43e-12,315;UBERON:0004120,1.43e-12,315;UBERON:0006603,1.43e-12,315;UBERON:0007023,5.83e-12,114;UBERON:0000479,3.35e-10,773;UBERON:0003081,2.84e-08,203;UBERON:0001009,1.04e-07,112;UBERON:0004535,6.42e-07,109 | |||
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| ||
|short_description=p10@RERE | |short_description=p10@RERE | ||
}} | }} |
Latest revision as of 11:49, 19 September 2015
Short description: | p10@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000465125_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.43e-12 | 315 |
mesoderm-derived structure | 1.43e-12 | 315 |
presumptive mesoderm | 1.43e-12 | 315 |
adult organism | 5.83e-12 | 114 |
tissue | 3.35e-10 | 773 |
lateral plate mesoderm | 2.84e-08 | 203 |
circulatory system | 1.04e-07 | 112 |
cardiovascular system | 6.42e-07 | 109 |