FFCP PHASE1:Hg19::chr13:110434061..110434079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110434061..110434079,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_at_chr13:110434061..110434079,- | |description=CAGE_peak_at_chr13:110434061..110434079,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!1.52e-11!15;CL:0000325!3.99e-07!39 | |ontology_enrichment_celltype=CL:0000136!1.52e-11!15;CL:0000325!3.99e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.48e-36;13!CL:0002561;3.43e-16;2!CL:0002617;7.58e-16;2!CL:0002559;4.57e-14;5!CL:0002615;3.27e-11;3!CL:0002623;7.11e-11;3!CL:0002567;1.19e-10;3!CL:0002581;1.32e-08;1!CL:0000622;7.37e-07;5 | |ontology_enrichment_celltype_v019=CL:0000136;1.48e-36;13!CL:0002561;3.43e-16;2!CL:0002617;7.58e-16;2!CL:0002559;4.57e-14;5!CL:0002615;3.27e-11;3!CL:0002623;7.11e-11;3!CL:0002567;1.19e-10;3!CL:0002581;1.32e-08;1!CL:0000622;7.37e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.10e-31,15;CL:0002561,4.00e-16,2;CL:0002617,4.65e-16,2;CL:0002559,4.78e-14,5;CL:0002615,3.11e-11,3;CL:0002567,6.61e-11,3;CL:0002623,8.90e-11,3;CL:0002581,9.74e-09,1;CL:0000622,8.41e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.78e-09!365;UBERON:0003102!2.07e-07!95;UBERON:0007023!2.71e-07!115;UBERON:0000924!6.27e-07!173;UBERON:0006601!6.27e-07!173;UBERON:0004121!7.76e-07!169 | |ontology_enrichment_uberon=UBERON:0000475!3.78e-09!365;UBERON:0003102!2.07e-07!95;UBERON:0007023!2.71e-07!115;UBERON:0000924!6.27e-07!173;UBERON:0006601!6.27e-07!173;UBERON:0004121!7.76e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;3.43e-16;2!UBERON:0005942;3.43e-16;2!UBERON:0005932;3.43e-16;2!UBERON:0002073;4.57e-14;5!UBERON:0003688;6.82e-12;6!UBERON:0002358;6.82e-12;6!UBERON:0003684;6.82e-12;6!UBERON:0001178;6.82e-12;6!UBERON:0001003;4.10e-08;15!UBERON:0007376;4.10e-08;15!UBERON:0004457;4.34e-08;9!UBERON:0000042;4.34e-08;9!UBERON:0000310;3.53e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0005933;3.43e-16;2!UBERON:0005942;3.43e-16;2!UBERON:0005932;3.43e-16;2!UBERON:0002073;4.57e-14;5!UBERON:0003688;6.82e-12;6!UBERON:0002358;6.82e-12;6!UBERON:0003684;6.82e-12;6!UBERON:0001178;6.82e-12;6!UBERON:0001003;4.10e-08;15!UBERON:0007376;4.10e-08;15!UBERON:0004457;4.34e-08;9!UBERON:0000042;4.34e-08;9!UBERON:0000310;3.53e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.00e-16,2;UBERON:0005942,4.00e-16,2;UBERON:0005932,4.00e-16,2;UBERON:0002073,4.78e-14,5;UBERON:0005086,4.78e-14,5;UBERON:0003688,8.52e-12,6;UBERON:0002358,8.52e-12,6;UBERON:0003684,8.52e-12,6;UBERON:0001178,8.52e-12,6;UBERON:0001003,4.18e-08,15;UBERON:0007376,4.18e-08,15;UBERON:0007383,4.18e-08,15;UBERON:0000310,2.94e-07,10 | |||
|phase1_expression=1.63510541343501,2.78330681058278,2.81908808191942,5.00366491765652,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.3218396401599,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0.219500570817251,0,0,0.555530670951178,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.992425680696705,0.626909658919938,0.581267877027924,0,0,0,0,0,0,0.063497894292169,1.52795370223311,0,1.71072446022705,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0.482385754501632,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,2.98578579323551,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.164230914106418,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.343609788497747,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,6.09576953731672,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,5.98419583706421,3.2589686222951,10.7220951867212,11.4755420748432,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,1.21319294033318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.436838552768056,0,0,0.991486114072017,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0,0.863710364874486,0.47775168788705,0,0,0,0,0,0.828864656652147,1.19502933965765,2.07377898544228,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.78894425931944,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=1.63510541343501,2.78330681058278,2.81908808191942,5.00366491765652,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.3218396401599,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0.219500570817251,0,0,0.555530670951178,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.992425680696705,0.626909658919938,0.581267877027924,0,0,0,0,0,0,0.063497894292169,1.52795370223311,0,1.71072446022705,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0.482385754501632,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,2.98578579323551,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.164230914106418,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.343609788497747,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,6.09576953731672,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,5.98419583706421,3.2589686222951,10.7220951867212,11.4755420748432,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,1.21319294033318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.436838552768056,0,0,0.991486114072017,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0,0.863710364874486,0.47775168788705,0,0,0,0,0,0.828864656652147,1.19502933965765,2.07377898544228,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0.78894425931944,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr13:110434061..110434079,- | |short_description=p@chr13:110434061..110434079,- | ||
}} | }} |
Latest revision as of 14:27, 24 July 2015
Short description: | p@chr13:110434061..110434079, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110434061..110434079, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.10e-31 | 15 |
outer root sheath cell | 4.00e-16 | 2 |
adipocyte of breast | 4.65e-16 | 2 |
hair follicle cell | 4.78e-14 | 5 |
adipocyte of omentum tissue | 3.11e-11 | 3 |
light melanocyte | 6.61e-11 | 3 |
acinar cell of salivary gland | 8.90e-11 | 3 |
perirenal preadipocyte | 9.74e-09 | 1 |
acinar cell | 8.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 4.00e-16 | 2 |
hair outer root sheath | 4.00e-16 | 2 |
bulb of hair follicle | 4.00e-16 | 2 |
hair follicle | 4.78e-14 | 5 |
hair follicle placode | 4.78e-14 | 5 |
omentum | 8.52e-12 | 6 |
peritoneum | 8.52e-12 | 6 |
abdominal cavity | 8.52e-12 | 6 |
visceral peritoneum | 8.52e-12 | 6 |
skin epidermis | 4.18e-08 | 15 |
outer epithelium | 4.18e-08 | 15 |
enveloping layer of ectoderm | 4.18e-08 | 15 |
breast | 2.94e-07 | 10 |