FFCP PHASE1:Hg19::chr11:116371394..116371405,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000452629_5end | |association_with_transcript=-47bp_to_ENST00000452629_5end | ||
|cluster_id=chr11:116371394..116371405,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_1_at_ENST00000452629_5end | |description=CAGE_peak_1_at_ENST00000452629_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!6.58e-08!2;CL:0000765!6.58e-08!2;CL:0000050!6.58e-08!2;CL:0000038!6.58e-08!2;CL:0000558!6.58e-08!2;CL:0000547!6.58e-08!2;CL:0000549!6.58e-08!2;CL:0000550!6.58e-08!2;CL:0000552!6.58e-08!2 | |ontology_enrichment_celltype=CL:0000764!6.58e-08!2;CL:0000765!6.58e-08!2;CL:0000050!6.58e-08!2;CL:0000038!6.58e-08!2;CL:0000558!6.58e-08!2;CL:0000547!6.58e-08!2;CL:0000549!6.58e-08!2;CL:0000550!6.58e-08!2;CL:0000552!6.58e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000243;2.40e-10;15!CL:0000125;2.40e-10;15!CL:0000095;2.31e-09;17!CL:0000333;3.35e-09;5!CL:0002319;7.13e-07;25 | |ontology_enrichment_celltype_v019=CL:0000243;2.40e-10;15!CL:0000125;2.40e-10;15!CL:0000095;2.31e-09;17!CL:0000333;3.35e-09;5!CL:0002319;7.13e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.46e-10,15;CL:0000125,2.46e-10,15;CL:0000030,2.46e-10,15;CL:0000339,2.46e-10,15;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0000333,4.45e-09,41;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.09e-15;10!UBERON:0003056;1.40e-14;3!CL:0000339;2.40e-10;15 | |ontology_enrichment_development_v019=UBERON:0006238;2.09e-15;10!UBERON:0003056;1.40e-14;3!CL:0000339;2.40e-10;15 | ||
|ontology_enrichment_disease=DOID:169!6.50e-10!6 | |ontology_enrichment_disease=DOID:169!6.50e-10!6 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.25e-14;11!DOID:5409;3.10e-11;4!DOID:169;7.01e-08;6!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |ontology_enrichment_disease_v019=DOID:3093;3.25e-14;11!DOID:5409;3.10e-11;4!DOID:169;7.01e-08;6!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,3.36e-14,11;DOID:5409,3.10e-11,4;DOID:169,6.78e-08,6;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.38e-15!20;UBERON:0000073!2.97e-15!94;UBERON:0001016!2.97e-15!94;UBERON:0002780!9.05e-15!41;UBERON:0001890!9.05e-15!41;UBERON:0006240!9.05e-15!41;UBERON:0003080!2.05e-14!42;UBERON:0001874!2.11e-14!1;UBERON:0002619!3.11e-14!22;UBERON:0002581!3.15e-14!1;UBERON:0000955!4.09e-14!69;UBERON:0006238!4.09e-14!69;UBERON:0001869!5.33e-14!32;UBERON:0002791!1.40e-13!33;UBERON:0002020!3.48e-13!34;UBERON:0003528!3.48e-13!34;UBERON:0001893!3.48e-13!34;UBERON:0003056!7.53e-13!61;UBERON:0000956!1.36e-12!25;UBERON:0000203!1.36e-12!25;UBERON:0001017!8.76e-12!82;UBERON:0000013!1.03e-11!5;UBERON:0002410!1.03e-11!5;UBERON:0001872!1.76e-11!5;UBERON:0005743!3.33e-11!86;UBERON:0001049!1.50e-10!57;UBERON:0005068!1.50e-10!57;UBERON:0006241!1.50e-10!57;UBERON:0007135!1.50e-10!57;UBERON:0002616!3.50e-10!59;UBERON:0003075!6.18e-09!86;UBERON:0007284!6.18e-09!86;UBERON:0002346!1.66e-08!90;UBERON:0004121!5.00e-08!169;UBERON:0001905!5.74e-08!2;UBERON:0002757!5.74e-08!2;UBERON:0010134!5.74e-08!2;UBERON:0002784!5.74e-08!2;UBERON:0005408!5.74e-08!2;UBERON:0001899!5.74e-08!2;UBERON:0000924!8.18e-08!173;UBERON:0006601!8.18e-08!173;UBERON:0000033!1.36e-07!123;UBERON:0001871!1.76e-07!7;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129;UBERON:0000010!6.79e-07!8 | |ontology_enrichment_uberon=UBERON:0001950!1.38e-15!20;UBERON:0000073!2.97e-15!94;UBERON:0001016!2.97e-15!94;UBERON:0002780!9.05e-15!41;UBERON:0001890!9.05e-15!41;UBERON:0006240!9.05e-15!41;UBERON:0003080!2.05e-14!42;UBERON:0001874!2.11e-14!1;UBERON:0002619!3.11e-14!22;UBERON:0002581!3.15e-14!1;UBERON:0000955!4.09e-14!69;UBERON:0006238!4.09e-14!69;UBERON:0001869!5.33e-14!32;UBERON:0002791!1.40e-13!33;UBERON:0002020!3.48e-13!34;UBERON:0003528!3.48e-13!34;UBERON:0001893!3.48e-13!34;UBERON:0003056!7.53e-13!61;UBERON:0000956!1.36e-12!25;UBERON:0000203!1.36e-12!25;UBERON:0001017!8.76e-12!82;UBERON:0000013!1.03e-11!5;UBERON:0002410!1.03e-11!5;UBERON:0001872!1.76e-11!5;UBERON:0005743!3.33e-11!86;UBERON:0001049!1.50e-10!57;UBERON:0005068!1.50e-10!57;UBERON:0006241!1.50e-10!57;UBERON:0007135!1.50e-10!57;UBERON:0002616!3.50e-10!59;UBERON:0003075!6.18e-09!86;UBERON:0007284!6.18e-09!86;UBERON:0002346!1.66e-08!90;UBERON:0004121!5.00e-08!169;UBERON:0001905!5.74e-08!2;UBERON:0002757!5.74e-08!2;UBERON:0010134!5.74e-08!2;UBERON:0002784!5.74e-08!2;UBERON:0005408!5.74e-08!2;UBERON:0001899!5.74e-08!2;UBERON:0000924!8.18e-08!173;UBERON:0006601!8.18e-08!173;UBERON:0000033!1.36e-07!123;UBERON:0001871!1.76e-07!7;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129;UBERON:0000010!6.79e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000013;3.35e-09;5!UBERON:0002410;3.35e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000013;3.35e-09;5!UBERON:0002410;3.35e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.22e-09,5;UBERON:0002410,3.22e-09,5;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3009007120636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50954735955355,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,7.90068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30875085165401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3009007120636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50954735955355,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,7.90068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30875085165401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000452629 | |short_description=p1@ENST00000452629 | ||
}} | }} |
Latest revision as of 18:27, 23 July 2015
Short description: | p1@ENST00000452629 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000452629_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -47bp_to_ENST00000452629_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.46e-10 | 15 |
glial cell | 2.46e-10 | 15 |
glioblast | 2.46e-10 | 15 |
glioblast (sensu Vertebrata) | 2.46e-10 | 15 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
migratory neural crest cell | 4.45e-09 | 41 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.22e-09 | 5 |
autonomic nervous system | 3.22e-09 | 5 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.36e-14 | 11 |
lung small cell carcinoma | 3.10e-11 | 4 |
neuroendocrine tumor | 6.78e-08 | 6 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |