FFCP PHASE1:Hg19::chr8:72756267..72756296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9242 | |EntrezGene=9242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |HGNC=7321 | ||
|TSSclassifier=strong | |||
|UniProt=O60682 | |UniProt=O60682 | ||
|association_with_transcript=102bp_to_AF087036_5end | |association_with_transcript=102bp_to_AF087036_5end | ||
|cluster_id=chr8:72756267..72756296,- | |||
|coexpression_cluster_id=C2927 | |coexpression_cluster_id=C2927 | ||
|description=CAGE_peak_4_at_MSC_5end | |description=CAGE_peak_4_at_MSC_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.10e-24!180;CL:0000048!1.26e-22!430;CL:0000723!3.93e-22!436;CL:0000034!1.99e-20!444;CL:0000219!2.48e-16!390;CL:0000057!2.59e-15!75;CL:0000134!6.20e-14!358;CL:0002320!1.75e-13!365;CL:0002371!7.99e-11!591;CL:0000144!8.40e-11!625;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!1.35e-10!54;CL:0000183!5.27e-09!59;CL:0000192!5.65e-09!42;CL:0000514!5.65e-09!42;CL:0002194!1.11e-08!63;CL:0000576!1.11e-08!63;CL:0000040!1.11e-08!63;CL:0000559!1.11e-08!63;CL:0000393!6.73e-08!60;CL:0000211!6.73e-08!60;CL:0000359!7.01e-08!32;CL:0002009!8.00e-08!65;CL:0002494!1.09e-07!16;CL:0002057!5.01e-07!42;CL:0000136!8.01e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.10e-24!180;CL:0000048!1.26e-22!430;CL:0000723!3.93e-22!436;CL:0000034!1.99e-20!444;CL:0000219!2.48e-16!390;CL:0000057!2.59e-15!75;CL:0000134!6.20e-14!358;CL:0002320!1.75e-13!365;CL:0002371!7.99e-11!591;CL:0000144!8.40e-11!625;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!1.35e-10!54;CL:0000183!5.27e-09!59;CL:0000192!5.65e-09!42;CL:0000514!5.65e-09!42;CL:0002194!1.11e-08!63;CL:0000576!1.11e-08!63;CL:0000040!1.11e-08!63;CL:0000559!1.11e-08!63;CL:0000393!6.73e-08!60;CL:0000211!6.73e-08!60;CL:0000359!7.01e-08!32;CL:0002009!8.00e-08!65;CL:0002494!1.09e-07!16;CL:0002057!5.01e-07!42;CL:0000136!8.01e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.42e-10;33!CL:0002057;9.42e-10;33!CL:0000473;4.38e-09;39!CL:0000234;4.38e-09;39!CL:0002494;5.01e-09;16!CL:0002334;7.81e-08;12!CL:0000359;1.09e-07;32!CL:0000192;1.75e-07;43 | |ontology_enrichment_celltype_v019=CL:0000860;9.42e-10;33!CL:0002057;9.42e-10;33!CL:0000473;4.38e-09;39!CL:0000234;4.38e-09;39!CL:0002494;5.01e-09;16!CL:0002334;7.81e-08;12!CL:0000359;1.09e-07;32!CL:0000192;1.75e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.26e-28,427;CL:0000723,2.93e-28,433;CL:0000034,4.87e-27,441;CL:0000219,1.19e-20,386;CL:0000134,2.00e-18,354;CL:0002320,2.52e-17,361;CL:0000057,1.61e-12,76;CL:0000680,5.55e-11,58;CL:0000056,5.55e-11,58;CL:0000355,5.55e-11,58;CL:0000187,5.65e-11,55;CL:0000473,4.95e-10,48;CL:0000234,4.95e-10,48;CL:0002194,1.02e-09,59;CL:0000576,1.02e-09,59;CL:0000040,1.02e-09,59;CL:0000559,1.02e-09,59;CL:0000192,1.12e-09,43;CL:0000514,1.12e-09,43;CL:0002494,4.92e-09,16;CL:0002009,5.83e-09,61;CL:0000860,1.32e-08,42;CL:0002057,1.32e-08,42;CL:0000393,1.49e-08,61;CL:0000211,1.49e-08,61;CL:0000359,4.97e-08,32;CL:0002334,1.10e-07,12;CL:0000839,2.54e-07,66;CL:0000136,2.98e-07,15;CL:0000557,4.95e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000514;1.75e-07;43!CL:0002057;5.29e-07;42 | |ontology_enrichment_development_v019=CL:0000514;1.75e-07;43!CL:0002057;5.29e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.90e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;3.90e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.35e-14!375;UBERON:0002204!4.93e-14!167;UBERON:0004290!3.65e-11!70;UBERON:0000914!2.86e-10!83;UBERON:0002329!2.86e-10!83;UBERON:0003077!2.86e-10!83;UBERON:0003059!2.86e-10!83;UBERON:0007282!2.86e-10!83;UBERON:0009618!2.86e-10!83;UBERON:0007285!2.86e-10!83;UBERON:0001134!4.66e-10!61;UBERON:0002036!4.66e-10!61;UBERON:0003082!4.66e-10!61;UBERON:0002385!7.63e-10!63;UBERON:0001015!7.63e-10!63;UBERON:0000383!7.63e-10!63;UBERON:0000486!2.51e-08!82;UBERON:0000948!1.12e-07!24;UBERON:0005498!1.12e-07!24;UBERON:0004140!1.12e-07!24;UBERON:0009881!1.12e-07!24;UBERON:0004141!1.12e-07!24;UBERON:0003084!1.12e-07!24;UBERON:0007005!1.12e-07!24;UBERON:0004139!1.12e-07!24;UBERON:0004291!1.12e-07!24;UBERON:0001013!5.16e-07!14;UBERON:0007100!8.00e-07!27 | |ontology_enrichment_uberon=UBERON:0002384!1.35e-14!375;UBERON:0002204!4.93e-14!167;UBERON:0004290!3.65e-11!70;UBERON:0000914!2.86e-10!83;UBERON:0002329!2.86e-10!83;UBERON:0003077!2.86e-10!83;UBERON:0003059!2.86e-10!83;UBERON:0007282!2.86e-10!83;UBERON:0009618!2.86e-10!83;UBERON:0007285!2.86e-10!83;UBERON:0001134!4.66e-10!61;UBERON:0002036!4.66e-10!61;UBERON:0003082!4.66e-10!61;UBERON:0002385!7.63e-10!63;UBERON:0001015!7.63e-10!63;UBERON:0000383!7.63e-10!63;UBERON:0000486!2.51e-08!82;UBERON:0000948!1.12e-07!24;UBERON:0005498!1.12e-07!24;UBERON:0004140!1.12e-07!24;UBERON:0009881!1.12e-07!24;UBERON:0004141!1.12e-07!24;UBERON:0003084!1.12e-07!24;UBERON:0007005!1.12e-07!24;UBERON:0004139!1.12e-07!24;UBERON:0004291!1.12e-07!24;UBERON:0001013!5.16e-07!14;UBERON:0007100!8.00e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;4.90e-08;22!UBERON:0001013;2.18e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0000948;4.90e-08;22!UBERON:0001013;2.18e-07;14 | ||
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| ||
|short_description=p4@MSC | |short_description=p4@MSC | ||
}} | }} |
Latest revision as of 01:07, 19 September 2015
Short description: | p4@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSC_5end |
Coexpression cluster: | C2927_cholangiocellular_mesenchymal_Fibroblast_CD14_glioma_Preadipocyte_Melanocyte |
Association with transcript: | 102bp_to_AF087036_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | O60682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.26e-28 | 427 |
somatic stem cell | 2.93e-28 | 433 |
stem cell | 4.87e-27 | 441 |
motile cell | 1.19e-20 | 386 |
mesenchymal cell | 2.00e-18 | 354 |
connective tissue cell | 2.52e-17 | 361 |
fibroblast | 1.61e-12 | 76 |
muscle precursor cell | 5.55e-11 | 58 |
myoblast | 5.55e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.55e-11 | 58 |
muscle cell | 5.65e-11 | 55 |
defensive cell | 4.95e-10 | 48 |
phagocyte | 4.95e-10 | 48 |
monopoietic cell | 1.02e-09 | 59 |
monocyte | 1.02e-09 | 59 |
monoblast | 1.02e-09 | 59 |
promonocyte | 1.02e-09 | 59 |
smooth muscle cell | 1.12e-09 | 43 |
smooth muscle myoblast | 1.12e-09 | 43 |
cardiocyte | 4.92e-09 | 16 |
macrophage dendritic cell progenitor | 5.83e-09 | 61 |
classical monocyte | 1.32e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-08 | 42 |
electrically responsive cell | 1.49e-08 | 61 |
electrically active cell | 1.49e-08 | 61 |
vascular associated smooth muscle cell | 4.97e-08 | 32 |
preadipocyte | 1.10e-07 | 12 |
myeloid lineage restricted progenitor cell | 2.54e-07 | 66 |
fat cell | 2.98e-07 | 15 |
granulocyte monocyte progenitor cell | 4.95e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-08 | 14 |