FFCP PHASE1:Hg19::chr8:32471880..32471883,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000522569_5end | |association_with_transcript=-9bp_to_ENST00000522569_5end | ||
|cluster_id=chr8:32471880..32471883,+ | |||
|description=CAGE_peak_41_at_NRG1_5end | |description=CAGE_peak_41_at_NRG1_5end | ||
|id=chr8:32471880..32471883,+ | |id=chr8:32471880..32471883,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.99e-65!42;CL:0000860!1.05e-60!45;CL:0002194!4.55e-41!63;CL:0000576!4.55e-41!63;CL:0000040!4.55e-41!63;CL:0000559!4.55e-41!63;CL:0002009!1.17e-39!65;CL:0000766!1.22e-39!76;CL:0000839!1.75e-36!70;CL:0000557!6.71e-36!71;CL:0000763!3.72e-25!112;CL:0000049!3.72e-25!112;CL:0002087!3.46e-23!119;CL:0000738!1.54e-22!140;CL:0002031!3.62e-20!124;CL:0000037!3.12e-17!172;CL:0000566!3.12e-17!172;CL:0002032!1.02e-16!165;CL:0000837!1.02e-16!165;CL:0000988!5.91e-16!182;CL:0000767!5.54e-08!3 | |ontology_enrichment_celltype=CL:0002057!1.99e-65!42;CL:0000860!1.05e-60!45;CL:0002194!4.55e-41!63;CL:0000576!4.55e-41!63;CL:0000040!4.55e-41!63;CL:0000559!4.55e-41!63;CL:0002009!1.17e-39!65;CL:0000766!1.22e-39!76;CL:0000839!1.75e-36!70;CL:0000557!6.71e-36!71;CL:0000763!3.72e-25!112;CL:0000049!3.72e-25!112;CL:0002087!3.46e-23!119;CL:0000738!1.54e-22!140;CL:0002031!3.62e-20!124;CL:0000037!3.12e-17!172;CL:0000566!3.12e-17!172;CL:0002032!1.02e-16!165;CL:0000837!1.02e-16!165;CL:0000988!5.91e-16!182;CL:0000767!5.54e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.15e-29;33!CL:0002057;5.15e-29;33!CL:0000473;1.04e-23;39!CL:0000234;1.04e-23;39!CL:0000576;1.58e-14;48!CL:0000766;1.25e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;5.15e-29;33!CL:0002057;5.15e-29;33!CL:0000473;1.04e-23;39!CL:0000234;1.04e-23;39!CL:0000576;1.58e-14;48!CL:0000766;1.25e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.07e-24,42;CL:0002057,4.07e-24,42;CL:0000473,3.34e-21,48;CL:0000234,3.34e-21,48;CL:0002194,4.10e-17,59;CL:0000576,4.10e-17,59;CL:0000040,4.10e-17,59;CL:0000559,4.10e-17,59;CL:0002009,1.38e-16,61;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;7.57e-17;42 | |ontology_enrichment_development_v019=CL:0002057;7.57e-17;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-38!102;UBERON:0003061!2.28e-38!102;UBERON:0002193!2.09e-34!112;UBERON:0002371!2.64e-31!80;UBERON:0001474!9.04e-29!86;UBERON:0002405!3.35e-26!115;UBERON:0004765!9.73e-24!101;UBERON:0001434!9.73e-24!101;UBERON:0003081!4.26e-16!216;UBERON:0002204!2.70e-12!167;UBERON:0000926!2.96e-08!448;UBERON:0004120!2.96e-08!448;UBERON:0006603!2.96e-08!448 | |ontology_enrichment_uberon=UBERON:0002390!2.28e-38!102;UBERON:0003061!2.28e-38!102;UBERON:0002193!2.09e-34!112;UBERON:0002371!2.64e-31!80;UBERON:0001474!9.04e-29!86;UBERON:0002405!3.35e-26!115;UBERON:0004765!9.73e-24!101;UBERON:0001434!9.73e-24!101;UBERON:0003081!4.26e-16!216;UBERON:0002204!2.70e-12!167;UBERON:0000926!2.96e-08!448;UBERON:0004120!2.96e-08!448;UBERON:0006603!2.96e-08!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0,0.868043482863407,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0.689491361473237,3.22742341791913,0,0.376484679085209,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,1.13477044938228,0,0.75374599577023,0,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0,2.58355851636939,1.20141514273205,1.28580469357664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0,0.868043482863407,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0.689491361473237,3.22742341791913,0,0.376484679085209,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,1.13477044938228,0,0.75374599577023,0,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0,2.58355851636939,1.20141514273205,1.28580469357664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p41@NRG1 | |short_description=p41@NRG1 | ||
}} | }} |
Latest revision as of 00:34, 18 September 2015
Short description: | p41@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_NRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000522569_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.07e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.07e-24 | 42 |
defensive cell | 3.34e-21 | 48 |
phagocyte | 3.34e-21 | 48 |
monopoietic cell | 4.10e-17 | 59 |
monocyte | 4.10e-17 | 59 |
monoblast | 4.10e-17 | 59 |
promonocyte | 4.10e-17 | 59 |
macrophage dendritic cell progenitor | 1.38e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |