FFCP PHASE1:Hg19::chr3:24339226..24339231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:24339226..24339231,- | |||
|coexpression_cluster_id=C393 | |coexpression_cluster_id=C393 | ||
|description=CAGE_peak_at_chr3:24339226..24339231,- | |description=CAGE_peak_at_chr3:24339226..24339231,- | ||
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|ontology_enrichment_celltype=CL:0002541!2.43e-60!3;CL:0000313!3.45e-21!1;CL:0000159!2.73e-11!2 | |ontology_enrichment_celltype=CL:0002541!2.43e-60!3;CL:0000313!3.45e-21!1;CL:0000159!2.73e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.52e-87;3!CL:0000349;4.52e-32;19!CL:0002537;1.40e-14;5!CL:0000723;3.82e-10;61!CL:0000134;3.03e-09;55!CL:0000048;8.17e-09;58 | |ontology_enrichment_celltype_v019=CL:0002541;1.52e-87;3!CL:0000349;4.52e-32;19!CL:0002537;1.40e-14;5!CL:0000723;3.82e-10;61!CL:0000134;3.03e-09;55!CL:0000048;8.17e-09;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.52e-87,3;CL:0000349,4.52e-32,19;CL:0002537,1.40e-14,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!3.45e-21!1 | |ontology_enrichment_disease=DOID:2152!3.45e-21!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.43e-60!3;UBERON:0000920!2.43e-60!3;UBERON:0003124!9.97e-46!7;UBERON:0005631!1.02e-35!14;UBERON:0000158!1.02e-35!14;UBERON:0004911!3.45e-21!1;UBERON:0001301!4.22e-21!1;UBERON:0000478!5.82e-21!24;UBERON:0004909!2.73e-11!2;UBERON:0004923!6.55e-09!57;UBERON:0006947!6.34e-08!3;UBERON:0004054!6.34e-08!3;UBERON:0002113!3.52e-07!27;UBERON:0003918!3.52e-07!27;UBERON:0005095!3.52e-07!27;UBERON:0007687!3.52e-07!27 | |ontology_enrichment_uberon=UBERON:0000476!2.43e-60!3;UBERON:0000920!2.43e-60!3;UBERON:0003124!9.97e-46!7;UBERON:0005631!1.02e-35!14;UBERON:0000158!1.02e-35!14;UBERON:0004911!3.45e-21!1;UBERON:0001301!4.22e-21!1;UBERON:0000478!5.82e-21!24;UBERON:0004909!2.73e-11!2;UBERON:0004923!6.55e-09!57;UBERON:0006947!6.34e-08!3;UBERON:0004054!6.34e-08!3;UBERON:0002113!3.52e-07!27;UBERON:0003918!3.52e-07!27;UBERON:0005095!3.52e-07!27;UBERON:0007687!3.52e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.52e-87;3!UBERON:0000920;1.52e-87;3!UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000478;1.16e-25;24!UBERON:0000305;8.16e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.52e-87;3!UBERON:0000920;1.52e-87;3!UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000478;1.16e-25;24!UBERON:0000305;8.16e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.52e-87,3;UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0003124,2.18e-38,7;UBERON:0000478,1.16e-25,24;UBERON:0000305,8.16e-11,7;UBERON:0004923,4.66e-10,66;UBERON:0004871,1.24e-09,8 | |||
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|short_description=p@chr3:24339226..24339231,- | |short_description=p@chr3:24339226..24339231,- | ||
}} | }} |
Latest revision as of 20:12, 29 July 2015
Short description: | p@chr3:24339226..24339231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:24339226..24339231, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.52e-87 | 3 |
extraembryonic cell | 4.52e-32 | 19 |
amnion mesenchymal stem cell | 1.40e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.52e-87 | 3 |
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
chorion | 2.18e-38 | 7 |
extraembryonic structure | 1.16e-25 | 24 |
amnion | 8.16e-11 | 7 |
organ component layer | 4.66e-10 | 66 |
somatic layer of lateral plate mesoderm | 1.24e-09 | 8 |