FFCP PHASE1:Hg19::chr9:12693291..12693298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000459790_5end | |association_with_transcript=-10bp_to_ENST00000459790_5end | ||
|cluster_id=chr9:12693291..12693298,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_33_at_TYRP1_5end | |description=CAGE_peak_33_at_TYRP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!6.58e-81!10;CL:0000541!6.58e-81!10;CL:0000147!4.54e-75!14;CL:0002567!3.70e-50!3;CL:0000710!2.04e-40!20;CL:0000075!6.83e-30!27;CL:0000325!9.43e-27!39;CL:0002077!2.05e-24!33;CL:0000333!1.13e-18!41;CL:0002566!3.75e-18!1;CL:0000149!1.86e-17!4;CL:0000133!4.63e-13!59;CL:0000221!7.56e-11!71;CL:0002586!9.64e-07!3 | |ontology_enrichment_celltype=CL:0000148!6.58e-81!10;CL:0000541!6.58e-81!10;CL:0000147!4.54e-75!14;CL:0002567!3.70e-50!3;CL:0000710!2.04e-40!20;CL:0000075!6.83e-30!27;CL:0000325!9.43e-27!39;CL:0002077!2.05e-24!33;CL:0000333!1.13e-18!41;CL:0002566!3.75e-18!1;CL:0000149!1.86e-17!4;CL:0000133!4.63e-13!59;CL:0000221!7.56e-11!71;CL:0002586!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;5.36e-84;3!CL:0000710;7.67e-69;20!CL:0000075;3.82e-51;27!CL:0002077;8.61e-36;34!CL:0002566;1.78e-29;1!CL:0000149;2.11e-08;4 | |ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;5.36e-84;3!CL:0000710;7.67e-69;20!CL:0000075;3.82e-51;27!CL:0002077;8.61e-36;34!CL:0002566;1.78e-29;1!CL:0000149;2.11e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.38e-137,10;CL:0000541,5.38e-137,10;CL:0000147,4.60e-98,14;CL:0002567,5.37e-84,3;CL:0000710,7.68e-69,20;CL:0000075,3.82e-51,27;CL:0002077,1.01e-40,34;CL:0000333,2.68e-32,41;CL:0002566,1.33e-29,1;CL:0000133,6.93e-23,59;CL:0000221,6.34e-19,72;CL:0000149,2.26e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.12e-12;59!CL:0000221;2.95e-10;72 | |ontology_enrichment_development_v019=CL:0000133;3.12e-12;59!CL:0000221;2.95e-10;72 | ||
|ontology_enrichment_disease=DOID:1909!2.02e-09!2 | |ontology_enrichment_disease=DOID:1909!2.02e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!4.39e-14!5;UBERON:0005388!4.39e-14!5;UBERON:0001802!4.39e-14!5;UBERON:0002240!9.12e-07!3;UBERON:0001781!9.64e-07!3;UBERON:0001782!9.64e-07!3;UBERON:0005424!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0000966!4.39e-14!5;UBERON:0005388!4.39e-14!5;UBERON:0001802!4.39e-14!5;UBERON:0002240!9.12e-07!3;UBERON:0001781!9.64e-07!3;UBERON:0001782!9.64e-07!3;UBERON:0005424!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p33@TYRP1 | |short_description=p33@TYRP1 | ||
}} | }} |
Latest revision as of 23:28, 24 September 2015
Short description: | p33@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -10bp_to_ENST00000459790_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.38e-137 | 10 |
melanoblast | 5.38e-137 | 10 |
pigment cell | 4.60e-98 | 14 |
light melanocyte | 5.37e-84 | 3 |
neurecto-epithelial cell | 7.68e-69 | 20 |
columnar/cuboidal epithelial cell | 3.82e-51 | 27 |
ecto-epithelial cell | 1.01e-40 | 34 |
migratory neural crest cell | 2.68e-32 | 41 |
dark melanocyte | 1.33e-29 | 1 |
neurectodermal cell | 6.93e-23 | 59 |
ectodermal cell | 6.34e-19 | 72 |
visual pigment cell | 2.26e-08 | 4 |