FFCP PHASE1:Hg19::chr1:204116178..204116187,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENST00000472340_5end | |association_with_transcript=-60bp_to_ENST00000472340_5end | ||
|cluster_id=chr1:204116178..204116187,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_19_at_ETNK2_5end | |description=CAGE_peak_19_at_ETNK2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.10e-20!12;CL:0000417!1.10e-20!12;CL:0000668!1.10e-20!12;CL:0000414!1.10e-20!12;CL:0000412!1.10e-20!12;CL:0000182!1.10e-20!12 | |ontology_enrichment_celltype=CL:0000181!1.10e-20!12;CL:0000417!1.10e-20!12;CL:0000668!1.10e-20!12;CL:0000414!1.10e-20!12;CL:0000412!1.10e-20!12;CL:0000182!1.10e-20!12 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2!CL:0000182;4.94e-12;12 | |ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2!CL:0000182;4.94e-12;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.48e-20!19;UBERON:0006925!3.48e-20!19;UBERON:0008836!3.48e-20!19;UBERON:0008835!1.90e-17!22;UBERON:0003894!1.90e-17!22;UBERON:0009854!1.08e-16!23;UBERON:0007499!2.30e-15!25;UBERON:0009497!2.30e-15!25;UBERON:0000015!2.30e-15!25;UBERON:0002423!2.30e-15!25;UBERON:0006235!2.30e-15!25;UBERON:0004161!2.30e-15!25;UBERON:0005057!8.92e-15!26;UBERON:0009856!8.92e-15!26;UBERON:0005172!3.69e-13!55;UBERON:0005173!3.69e-13!55;UBERON:0002365!2.12e-12!31;UBERON:0002330!2.12e-12!31;UBERON:0002417!8.03e-12!61;UBERON:0000916!8.03e-12!61;UBERON:0002368!5.50e-11!35;UBERON:0000949!1.53e-08!45;UBERON:0003929!4.14e-07!54 | |ontology_enrichment_uberon=UBERON:0002107!3.48e-20!19;UBERON:0006925!3.48e-20!19;UBERON:0008836!3.48e-20!19;UBERON:0008835!1.90e-17!22;UBERON:0003894!1.90e-17!22;UBERON:0009854!1.08e-16!23;UBERON:0007499!2.30e-15!25;UBERON:0009497!2.30e-15!25;UBERON:0000015!2.30e-15!25;UBERON:0002423!2.30e-15!25;UBERON:0006235!2.30e-15!25;UBERON:0004161!2.30e-15!25;UBERON:0005057!8.92e-15!26;UBERON:0009856!8.92e-15!26;UBERON:0005172!3.69e-13!55;UBERON:0005173!3.69e-13!55;UBERON:0002365!2.12e-12!31;UBERON:0002330!2.12e-12!31;UBERON:0002417!8.03e-12!61;UBERON:0000916!8.03e-12!61;UBERON:0002368!5.50e-11!35;UBERON:0000949!1.53e-08!45;UBERON:0003929!4.14e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0002423;1.18e-12;25!UBERON:0002365;1.13e-10;31!UBERON:0002330;1.13e-10;31!UBERON:0002368;3.12e-08;33!UBERON:0000949;3.61e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0002423;1.18e-12;25!UBERON:0002365;1.13e-10;31!UBERON:0002330;1.13e-10;31!UBERON:0002368;3.12e-08;33!UBERON:0000949;3.61e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.27e-16,19;UBERON:0006925,2.27e-16,19;UBERON:0008836,2.27e-16,19;UBERON:0008835,2.99e-14,22;UBERON:0003894,2.99e-14,22;UBERON:0009854,1.15e-13,23;UBERON:0007499,1.23e-12,25;UBERON:0009497,1.23e-12,25;UBERON:0000015,1.23e-12,25;UBERON:0002423,1.23e-12,25;UBERON:0006235,1.23e-12,25;UBERON:0004161,1.23e-12,25;UBERON:0009856,3.51e-12,26;UBERON:0002365,2.44e-10,31;UBERON:0002330,2.44e-10,31;UBERON:0002368,3.06e-09,35;UBERON:0000949,2.44e-07,45 | |||
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|short_description=p19@ETNK2 | |short_description=p19@ETNK2 | ||
}} | }} |
Latest revision as of 00:19, 20 September 2015
Short description: | p19@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ETNK2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -60bp_to_ENST00000472340_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.27e-16 | 19 |
digestive gland | 2.27e-16 | 19 |
liver bud | 2.27e-16 | 19 |
hepatic diverticulum | 2.99e-14 | 22 |
liver primordium | 2.99e-14 | 22 |
digestive tract diverticulum | 1.15e-13 | 23 |
epithelial sac | 1.23e-12 | 25 |
epithelium of foregut-midgut junction | 1.23e-12 | 25 |
anatomical boundary | 1.23e-12 | 25 |
hepatobiliary system | 1.23e-12 | 25 |
foregut-midgut junction | 1.23e-12 | 25 |
septum transversum | 1.23e-12 | 25 |
sac | 3.51e-12 | 26 |
exocrine gland | 2.44e-10 | 31 |
exocrine system | 2.44e-10 | 31 |
endocrine gland | 3.06e-09 | 35 |
endocrine system | 2.44e-07 | 45 |