FFCP PHASE1:Hg19::chr5:134370033..134370042,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5307 | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |HGNC=9004 | ||
|TSSclassifier=strong | |||
|UniProt=P78337 | |UniProt=P78337 | ||
|association_with_transcript=-45bp_to_ENST00000265340_5end | |association_with_transcript=-45bp_to_ENST00000265340_5end | ||
|cluster_id=chr5:134370033..134370042,- | |||
|coexpression_cluster_id=C4464 | |coexpression_cluster_id=C4464 | ||
|description=CAGE_peak_5_at_PITX1_5end | |description=CAGE_peak_5_at_PITX1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!6.69e-23!254;CL:0000223!1.41e-17!59;CL:0002076!5.20e-17!43;CL:0002251!2.42e-08!21;CL:0002368!5.12e-08!13;CL:0000082!9.68e-07!19 | |ontology_enrichment_celltype=CL:0000066!6.69e-23!254;CL:0000223!1.41e-17!59;CL:0002076!5.20e-17!43;CL:0002251!2.42e-08!21;CL:0002368!5.12e-08!13;CL:0000082!9.68e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.88e-13;9!CL:0002632;1.88e-13;9!CL:0002368;1.41e-11;13!CL:0002076;1.81e-09;42!CL:0000307;3.86e-09;3 | |ontology_enrichment_celltype_v019=CL:0002202;1.88e-13;9!CL:0002632;1.88e-13;9!CL:0002368;1.41e-11;13!CL:0002076;1.81e-09;42!CL:0000307;3.86e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.05e-13,9;CL:0002632,1.05e-13,9;CL:0002076,1.28e-13,42;CL:0002368,8.70e-12,13;CL:0000223,5.39e-10,58;CL:0000066,8.37e-10,253;CL:0000068,4.81e-09,3;CL:0000069,4.81e-09,3;CL:0000307,4.81e-09,3;CL:0000377,4.81e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.86e-09;3 | |ontology_enrichment_development_v019=CL:0000377;3.86e-09;3 | ||
|ontology_enrichment_disease=DOID:0050687!9.30e-37!143;DOID:162!4.52e-36!235;DOID:14566!4.42e-35!239;DOID:305!5.60e-33!106;DOID:0050686!3.11e-08!137;DOID:1749!5.70e-08!14 | |ontology_enrichment_disease=DOID:0050687!9.30e-37!143;DOID:162!4.52e-36!235;DOID:14566!4.42e-35!239;DOID:305!5.60e-33!106;DOID:0050686!3.11e-08!137;DOID:1749!5.70e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-12,106;DOID:1749,1.52e-10,14;DOID:0050687,5.99e-09,143;DOID:162,9.84e-08,235;DOID:14566,2.21e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.57e-25!169;UBERON:0000925!1.57e-25!169;UBERON:0006595!1.57e-25!169;UBERON:0001007!2.00e-23!155;UBERON:0001555!2.00e-23!155;UBERON:0007026!2.00e-23!155;UBERON:0004921!2.55e-22!129;UBERON:0004185!2.55e-22!129;UBERON:0000077!1.72e-18!130;UBERON:0001004!1.47e-14!72;UBERON:0001041!5.94e-14!98;UBERON:0008947!1.05e-12!38;UBERON:0003258!1.05e-12!38;UBERON:0000065!1.58e-12!53;UBERON:0000072!5.24e-12!46;UBERON:0005911!3.98e-11!82;UBERON:0005153!1.22e-10!37;UBERON:0000161!1.38e-10!35;UBERON:0003104!9.38e-10!238;UBERON:0009142!9.38e-10!238;UBERON:0000344!2.59e-08!12;UBERON:0005178!3.43e-08!34;UBERON:0002224!3.43e-08!34;UBERON:0001737!6.90e-08!9;UBERON:0005181!1.02e-07!35;UBERON:0005157!1.72e-07!51;UBERON:0001046!2.93e-07!19;UBERON:0000162!6.40e-07!14;UBERON:0001353!6.40e-07!14;UBERON:0000163!6.40e-07!14;UBERON:0006866!6.40e-07!14;UBERON:0000164!6.40e-07!14;UBERON:0000931!6.40e-07!14;UBERON:0004802!9.68e-07!19;UBERON:0000115!9.68e-07!19 | |ontology_enrichment_uberon=UBERON:0004119!1.57e-25!169;UBERON:0000925!1.57e-25!169;UBERON:0006595!1.57e-25!169;UBERON:0001007!2.00e-23!155;UBERON:0001555!2.00e-23!155;UBERON:0007026!2.00e-23!155;UBERON:0004921!2.55e-22!129;UBERON:0004185!2.55e-22!129;UBERON:0000077!1.72e-18!130;UBERON:0001004!1.47e-14!72;UBERON:0001041!5.94e-14!98;UBERON:0008947!1.05e-12!38;UBERON:0003258!1.05e-12!38;UBERON:0000065!1.58e-12!53;UBERON:0000072!5.24e-12!46;UBERON:0005911!3.98e-11!82;UBERON:0005153!1.22e-10!37;UBERON:0000161!1.38e-10!35;UBERON:0003104!9.38e-10!238;UBERON:0009142!9.38e-10!238;UBERON:0000344!2.59e-08!12;UBERON:0005178!3.43e-08!34;UBERON:0002224!3.43e-08!34;UBERON:0001737!6.90e-08!9;UBERON:0005181!1.02e-07!35;UBERON:0005157!1.72e-07!51;UBERON:0001046!2.93e-07!19;UBERON:0000162!6.40e-07!14;UBERON:0001353!6.40e-07!14;UBERON:0000163!6.40e-07!14;UBERON:0006866!6.40e-07!14;UBERON:0000164!6.40e-07!14;UBERON:0000931!6.40e-07!14;UBERON:0004802!9.68e-07!19;UBERON:0000115!9.68e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-12;9!UBERON:0001557;1.16e-12;9!UBERON:0007196;7.74e-10;15!UBERON:0001558;7.74e-10;15!UBERON:0000072;1.38e-09;37!UBERON:0000065;4.31e-09;44!UBERON:0000485;4.78e-09;7!UBERON:0001043;1.47e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-12;9!UBERON:0001557;1.16e-12;9!UBERON:0007196;7.74e-10;15!UBERON:0001558;7.74e-10;15!UBERON:0000072;1.38e-09;37!UBERON:0000065;4.31e-09;44!UBERON:0000485;4.78e-09;7!UBERON:0001043;1.47e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.04e-15,118;UBERON:0001007,1.77e-13,145;UBERON:0001555,1.77e-13,145;UBERON:0007026,1.77e-13,145;UBERON:0004119,3.31e-13,160;UBERON:0000925,3.31e-13,160;UBERON:0006595,3.31e-13,160;UBERON:0001737,6.31e-13,9;UBERON:0001004,1.91e-12,74;UBERON:0000072,1.29e-11,47;UBERON:0008947,1.64e-11,38;UBERON:0003258,1.64e-11,38;UBERON:0001041,4.61e-11,87;UBERON:0000065,6.88e-11,54;UBERON:0007196,7.50e-10,15;UBERON:0001558,7.50e-10,15;UBERON:0000161,2.02e-09,36;UBERON:0001557,2.03e-09,19;UBERON:0001043,9.33e-09,3;UBERON:0009143,9.33e-09,3;UBERON:0001046,3.08e-07,19;UBERON:0000485,4.64e-07,9;UBERON:0005178,5.24e-07,34;UBERON:0002224,5.24e-07,34;UBERON:0005181,9.65e-07,35 | |||
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| ||
|short_description=p5@PITX1 | |short_description=p5@PITX1 | ||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p5@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PITX1_5end |
Coexpression cluster: | C4464_anaplastic_Prostate_esophagus_Smooth_glassy_cervical_biphenotypic |
Association with transcript: | -45bp_to_ENST00000265340_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.05e-13 | 9 |
epithelial cell of lower respiratory tract | 1.05e-13 | 9 |
endo-epithelial cell | 1.28e-13 | 42 |
respiratory epithelial cell | 8.70e-12 | 13 |
endodermal cell | 5.39e-10 | 58 |
epithelial cell | 8.37e-10 | 253 |
duct epithelial cell | 4.81e-09 | 3 |
branched duct epithelial cell | 4.81e-09 | 3 |
tracheal epithelial cell | 4.81e-09 | 3 |
tracheoblast | 4.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.04e-15 | 118 |
digestive system | 1.77e-13 | 145 |
digestive tract | 1.77e-13 | 145 |
primitive gut | 1.77e-13 | 145 |
endoderm-derived structure | 3.31e-13 | 160 |
endoderm | 3.31e-13 | 160 |
presumptive endoderm | 3.31e-13 | 160 |
larynx | 6.31e-13 | 9 |
respiratory system | 1.91e-12 | 74 |
segment of respiratory tract | 1.29e-11 | 47 |
respiratory primordium | 1.64e-11 | 38 |
endoderm of foregut | 1.64e-11 | 38 |
foregut | 4.61e-11 | 87 |
respiratory tract | 6.88e-11 | 54 |
tracheobronchial tree | 7.50e-10 | 15 |
lower respiratory tract | 7.50e-10 | 15 |
orifice | 2.02e-09 | 36 |
upper respiratory tract | 2.03e-09 | 19 |
esophagus | 9.33e-09 | 3 |
esophageal region | 9.33e-09 | 3 |
hindgut | 3.08e-07 | 19 |
simple columnar epithelium | 4.64e-07 | 9 |
thoracic cavity element | 5.24e-07 | 34 |
thoracic cavity | 5.24e-07 | 34 |
thoracic segment organ | 9.65e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-12 | 106 |
squamous cell carcinoma | 1.52e-10 | 14 |
cell type cancer | 5.99e-09 | 143 |
cancer | 9.84e-08 | 235 |
disease of cellular proliferation | 2.21e-07 | 239 |