FFCP PHASE1:Hg19::chr22:33255512..33255535,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:33255512..33255535,+
|short_description=p5@TIMP3
|description=CAGE_peak_5_at_TIMP3_5end
|association_with_transcript=49bp_to_X80791_5end
|EntrezGene=7078...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_X80791_5end | |||
|cluster_id=chr22:33255512..33255535,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_5_at_TIMP3_5end | |||
|id=chr22:33255512..33255535,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-12!180;CL:0000057!1.13e-08!75;CL:0002334!1.98e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.02e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.73e-09,12;CL:0000057,5.83e-09,76;CL:0000136,5.19e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.36e-10!365;UBERON:0004923!1.50e-09!57;UBERON:0000468!2.04e-08!659;UBERON:0007023!2.38e-07!115;UBERON:0000467!3.18e-07!625;UBERON:0000480!4.60e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.47e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,4.54e-09,66;UBERON:0001013,5.60e-08,14;UBERON:0005631,7.15e-08,14;UBERON:0000158,7.15e-08,14 | |||
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| ||
|short_description=p5@TIMP3 | |||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p5@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 49bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.73e-09 | 12 |
fibroblast | 5.83e-09 | 76 |
fat cell | 5.19e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 4.54e-09 | 66 |
adipose tissue | 5.60e-08 | 14 |
extraembryonic membrane | 7.15e-08 | 14 |
membranous layer | 7.15e-08 | 14 |