FFCP PHASE1:Hg19::chr12:72481040..72481051,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29953 | |EntrezGene=29953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30748 | |HGNC=30748 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548156_5end | |association_with_transcript=0bp_to_ENST00000548156_5end | ||
|cluster_id=chr12:72481040..72481051,+ | |||
|coexpression_cluster_id=C178 | |coexpression_cluster_id=C178 | ||
|description=CAGE_peak_19_at_TRHDE_5end | |description=CAGE_peak_19_at_TRHDE_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.64e-38;7 | |ontology_enrichment_development_v019=UBERON:0004872;1.64e-38;7 | ||
|ontology_enrichment_disease=DOID:3369!2.21e-40!1;DOID:1192!1.83e-14!3 | |ontology_enrichment_disease=DOID:3369!2.21e-40!1;DOID:1192!1.83e-14!3 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.68e-53!3;UBERON:0004854!1.68e-53!3;UBERON:0009034!1.68e-53!3;UBERON:0002095!1.68e-53!3;UBERON:0004782!1.68e-53!3;UBERON:0003281!1.68e-53!3;UBERON:0009664!1.68e-53!3;UBERON:0002296!1.68e-53!3;UBERON:0005602!1.68e-53!3;UBERON:0001179!1.68e-53!3;UBERON:0006293!1.68e-53!3;UBERON:0004177!1.14e-23!7;UBERON:0000945!7.35e-21!8;UBERON:0010039!7.35e-21!8;UBERON:0004457!2.75e-14!12;UBERON:0000042!2.75e-14!12;UBERON:0002075!7.10e-10!18;UBERON:0003887!1.32e-08!21;UBERON:0005057!3.90e-07!26 | |ontology_enrichment_uberon=UBERON:0002106!1.68e-53!3;UBERON:0004854!1.68e-53!3;UBERON:0009034!1.68e-53!3;UBERON:0002095!1.68e-53!3;UBERON:0004782!1.68e-53!3;UBERON:0003281!1.68e-53!3;UBERON:0009664!1.68e-53!3;UBERON:0002296!1.68e-53!3;UBERON:0005602!1.68e-53!3;UBERON:0001179!1.68e-53!3;UBERON:0006293!1.68e-53!3;UBERON:0004177!1.14e-23!7;UBERON:0000945!7.35e-21!8;UBERON:0010039!7.35e-21!8;UBERON:0004457!2.75e-14!12;UBERON:0000042!2.75e-14!12;UBERON:0002075!7.10e-10!18;UBERON:0003887!1.32e-08!21;UBERON:0005057!3.90e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.79e-88;3!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0002075;8.72e-16;18!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.74e-09;32!UBERON:0004458;7.82e-07;48 | |ontology_enrichment_uberon_v019=UBERON:0002106;7.79e-88;3!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0002075;8.72e-16;18!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.74e-09;32!UBERON:0004458;7.82e-07;48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.74e-88,3;UBERON:0004854,9.74e-88,3;UBERON:0009034,9.74e-88,3;UBERON:0002095,9.74e-88,3;UBERON:0004782,9.74e-88,3;UBERON:0003281,9.74e-88,3;UBERON:0009664,9.74e-88,3;UBERON:0002296,9.74e-88,3;UBERON:0005602,9.74e-88,3;UBERON:0001179,9.74e-88,3;UBERON:0006293,9.74e-88,3;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000945,7.68e-34,8;UBERON:0010039,7.68e-34,8;UBERON:0004457,5.14e-23,12;UBERON:0000042,5.14e-23,12;UBERON:0003887,5.14e-23,12;UBERON:0002075,9.05e-16,18;UBERON:0005409,2.77e-11,25;UBERON:0000077,3.10e-10,29;UBERON:0002323,7.52e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61269735636814,2.32048396704878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61269735636814,2.32048396704878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@TRHDE | |short_description=p19@TRHDE | ||
}} | }} |
Latest revision as of 18:10, 24 September 2015
Short description: | p19@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TRHDE_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 0bp_to_ENST00000548156_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 9.74e-88 | 3 |
gastrointestinal system mesentery | 9.74e-88 | 3 |
stomach region | 9.74e-88 | 3 |
mesentery | 9.74e-88 | 3 |
gastrointestinal system serosa | 9.74e-88 | 3 |
mesentery of stomach | 9.74e-88 | 3 |
gut mesentery | 9.74e-88 | 3 |
dorsal mesentery | 9.74e-88 | 3 |
dorsal mesogastrium | 9.74e-88 | 3 |
peritoneal cavity | 9.74e-88 | 3 |
spleen primordium | 9.74e-88 | 3 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
stomach | 7.68e-34 | 8 |
food storage organ | 7.68e-34 | 8 |
cavity lining | 5.14e-23 | 12 |
serous membrane | 5.14e-23 | 12 |
intraembryonic coelom | 5.14e-23 | 12 |
viscus | 9.05e-16 | 18 |
gastrointestinal system | 2.77e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
body cavity | 7.52e-07 | 46 |