FFCP PHASE1:Hg19::chr11:2154767..2154781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_uc001lvf.2_5end | |association_with_transcript=122bp_to_uc001lvf.2_5end | ||
|cluster_id=chr11:2154767..2154781,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_36_at_IGF2_5end | |description=CAGE_peak_36_at_IGF2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.46e-20;19!CL:0000669;1.42e-08;4!CL:0002541;1.04e-07;3!CL:0002577;1.85e-07;3!CL:0002537;2.75e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;7.46e-20;19!CL:0000669;1.42e-08;4!CL:0002541;1.04e-07;3!CL:0002577;1.85e-07;3!CL:0002537;2.75e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.29e-20,19;CL:0000669,2.95e-08,4;CL:0002541,1.06e-07,3;CL:0002577,1.88e-07,3;CL:0002537,3.69e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.91e-15!14;UBERON:0000158!1.91e-15!14;UBERON:0000478!6.24e-11!24;UBERON:0003124!7.03e-09!7;UBERON:0000305!3.36e-08!7;UBERON:0004119!3.53e-08!169;UBERON:0000925!3.53e-08!169;UBERON:0006595!3.53e-08!169;UBERON:0001046!5.99e-07!19;UBERON:0004871!6.40e-07!8;UBERON:0004923!7.77e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.91e-15!14;UBERON:0000158!1.91e-15!14;UBERON:0000478!6.24e-11!24;UBERON:0003124!7.03e-09!7;UBERON:0000305!3.36e-08!7;UBERON:0004119!3.53e-08!169;UBERON:0000925!3.53e-08!169;UBERON:0006595!3.53e-08!169;UBERON:0001046!5.99e-07!19;UBERON:0004871!6.40e-07!8;UBERON:0004923!7.77e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-19;24!UBERON:0005631;4.73e-17;10!UBERON:0000158;4.73e-17;10!UBERON:0000305;3.77e-11;7!UBERON:0001987;2.52e-09;4!UBERON:0003124;1.04e-07;3!UBERON:0000920;1.04e-07;3!UBERON:0000922;1.46e-07;49!UBERON:0002107;5.82e-07;19!UBERON:0006925;5.82e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-19;24!UBERON:0005631;4.73e-17;10!UBERON:0000158;4.73e-17;10!UBERON:0000305;3.77e-11;7!UBERON:0001987;2.52e-09;4!UBERON:0003124;1.04e-07;3!UBERON:0000920;1.04e-07;3!UBERON:0000922;1.46e-07;49!UBERON:0002107;5.82e-07;19!UBERON:0006925;5.82e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.70e-24,14;UBERON:0000158,1.70e-24,14;UBERON:0000478,1.22e-19,24;UBERON:0003124,2.41e-15,7;UBERON:0000305,5.21e-11,7;UBERON:0004871,1.64e-09,8;UBERON:0001987,2.54e-09,4;UBERON:0004340,2.54e-09,4;UBERON:0004923,2.38e-08,66;UBERON:0000920,1.06e-07,3;UBERON:0002107,5.16e-07,19;UBERON:0006925,5.16e-07,19;UBERON:0008836,5.16e-07,19 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,2.00146596706261,2.68176656656373,4.36169262050184,0,0,0,0.245733936501509,0.697801167972428,15.0724546769819,15.2984847372503,0.247532705920093,1.98838425436749,0,0,0,0,0.246242116153576,1.02000345622126,2.19418305034661,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,2.57307626996383,1.72852777344,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,4.20353779773547,0,0,0,0.375355559615893,0,0.438977620880838,0,0.600952235626387,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,1.61646056818812,0,0,0,0,0,0,0,0,1.62671520017326,0.518305275076852,0,0,0,0,0,6.03678306441573,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,1.18157981336281,0,13.2827513626563,0,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,4.3596006883328,0.1466765716419,0,0,0,0.797814349754612,1.04007436911366,0.257207374262142,2.83698264046557,0.799266537048298,0.714889968290738,34.1851611396609,1.64648067356154,0,1.77695974371273,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,0.500170521059677,0.542530047399471,1.66376689224646,3.56857977594324,2.20783381047509,1.40569697991256,0.601892199455438,2.27407504055985,1.03473071292505,0,0.184369168541703,0,30.153378249262,53.8735175383044,0,0,0,4.24378600024763,19.9722527412596,9.97887967987945,0,0.153461973288062,1.12264037773229,0,1.53512174720011,0,1.48418066444991,0,0,0,0,0,8.94359926978004,0.40101294060657,0,0.34444334449382,0.910455840033585,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,1.08378575017541,1.00337954770971,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.870100163485371,0.426133137080504,4.5406338179836,0.826424576804891,0.768760269460425,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0.255897791311334,2.99557291623744,0,0,1.07923474549989,0,0.235624804691373,0,0,0,0,0,0,1.09199929126389,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,2.07116361708914,0.86101074534246,0,1.7737206141467,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.852408440419239,38.1991175580304,9.79983446747707,33.4805165288163,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.461701551022782,0,1.38338342632836,0,0,32.8571194523877,5.12946523050429,112.470337739932,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,3.05515072466813,0,0,0,0.067401132980677,14.4463976513782,0,0,0,0,0.394584402849391,3.62972148145992,0.91821828489147,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.193978032976839,0,2.25980740780532,0,0,0,0,0,0.213452994739353,14.1864822803312,0,0,27.2836046600524,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.14580212005842,0,0.399358000997982,0.429226048136571,0,1.41085292222125,0,0,8.42980050687293,7.99433826297315,8.35803943791893,6.49621377997342,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0.83927341015997,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,1.17241786942466,3.97520666736664,0,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,4.40030541129469,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.54604819096007,0,0,0,0,0,0,0,1.76337971845342,0.6124909547064,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0,0,1.5913297769302,0.300841313397029,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0.992422356778588,0,0.127762427639595,1.07140367175657,0,1.21393120847326,0,5.49954695008361,0,0,0,0.0657727735628491,0,0.111231401892069,0.156986185701028,0.157115589916002,1.12108865325516,1.82631744101899,0,0,0.500335809236594,0,0,9.21448843203671,1.60342272946051,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.853425474875886,0,0.205325613712494,67.2692370176156,4.37139893753226,0,10.1464895332298,0.118920090777569,0,0,0,0,1.74847648403166,0,0.490296643507811,0,1.37415926980462,0,4.226557275834,0,0,0.45120521581504,0,0,0,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| ||
|short_description=p36@IGF2 | |short_description=p36@IGF2 | ||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p36@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 122bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.29e-20 | 19 |
pericyte cell | 2.95e-08 | 4 |
chorionic membrane mesenchymal stem cell | 1.06e-07 | 3 |
placental epithelial cell | 1.88e-07 | 3 |
amnion mesenchymal stem cell | 3.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.70e-24 | 14 |
membranous layer | 1.70e-24 | 14 |
extraembryonic structure | 1.22e-19 | 24 |
chorion | 2.41e-15 | 7 |
amnion | 5.21e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.64e-09 | 8 |
placenta | 2.54e-09 | 4 |
allantois | 2.54e-09 | 4 |
organ component layer | 2.38e-08 | 66 |
egg chorion | 1.06e-07 | 3 |
liver | 5.16e-07 | 19 |
digestive gland | 5.16e-07 | 19 |
liver bud | 5.16e-07 | 19 |