FFCP PHASE1:Hg19::chr16:2069744..2069766,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283869 | |EntrezGene=283869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30509 | |HGNC=30509 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N729 | |UniProt=Q8N729 | ||
|association_with_transcript=223bp_to_ENST00000329610,NM_001099456,uc002coh.3_5end | |association_with_transcript=223bp_to_ENST00000329610,NM_001099456,uc002coh.3_5end | ||
|cluster_id=chr16:2069744..2069766,+ | |||
|coexpression_cluster_id=C3541 | |coexpression_cluster_id=C3541 | ||
|description=CAGE_peak_2_at_NPW_5end | |description=CAGE_peak_2_at_NPW_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.27e-13!180;CL:0000057!2.47e-07!75 | |ontology_enrichment_celltype=CL:0000055!4.27e-13!180;CL:0000057!2.47e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000147;3.69e-08;14 | |ontology_enrichment_celltype_v019=CL:0000147;3.69e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,3.48e-08,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.00e-07;10 | |ontology_enrichment_disease_v019=DOID:171;1.00e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.04e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000119!4.53e-09!312;UBERON:0000483!1.39e-08!309;UBERON:0005256!2.28e-08!143;UBERON:0000490!1.04e-07!138;UBERON:0000481!1.51e-07!347;UBERON:0000475!3.43e-07!365 | |ontology_enrichment_uberon=UBERON:0000119!4.53e-09!312;UBERON:0000483!1.39e-08!309;UBERON:0005256!2.28e-08!143;UBERON:0000490!1.04e-07!138;UBERON:0000481!1.51e-07!347;UBERON:0000475!3.43e-07!365 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.16e-09,160;UBERON:0009142,9.16e-09,160 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,2.45733936501509,2.79120467188971,0,0.263766978228454,5.81701858912219,3.64537113300707,0,1.20538905604795,0,0,0.61560529038394,3.67201244239655,0.313454721478088,0.572471974262113,0.958120975510189,0.502170558379211,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,23.7816355861226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,1.12101712596307,20.2805745276809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.17366355134002,0.722878304769133,1.00267582127178,2.02785126545153,0,0,1.03988298880475,3.32594096193846,1.31752178539689,0.851363990735132,0.364295288292542,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,1.04142150482278,0,0.838998872419812,1.37559020970034,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0.735326160691737,6.48113558305408,0.625098097988558,1.57170560838319,2.0270066486998,4.5994991239765,0,0.916008719652036,0,0,3.48875241714027,0,0.506522046658319,0,1.72101972449288,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,1.24484414159907,0.808264032418128,1.30769522490767,0.756787138224657,1.72852777344,5.15507150034353,5.61888138294577,0.570471821544449,4.33401173600223,1.17434498643765,0.971237666208789,1.26405726032024,0.408308342509787,1.10550885580591,0.826606249406124,3.56400857184616,0,6.37112953356618,7.18618141816238,0.505008341862199,1.62654075833553,0.554128230968366,0.438977620880838,0.30648779579902,0.600952235626387,1.02088964844019,1.4351170855109,0.85422955527427,1.27159140695737,1.50045548042201,1.23663035086127,0.515281080091258,1.67505170698431,0.506328996723799,0.876933046450788,0.504867548488229,0.552299391853796,1.45481451136931,1.77504796258307,0.403008392910561,1.69560592310488,0.193260853163297,1.09098448236334,0,3.65921118388786,1.06023814657188,3.36962434321603,2.28054321033815,4.28945446488568,1.82488679537915,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,6.5851841813024,20.5812195939759,1.26755034821831,4.91413608338813,1.18157981336281,0,1.22988438543114,3.25978839567199,0.219500570817251,1.1240175325762,0.402115889646523,1.48141512253647,3.58389135841357,2.07986957055916,1.44331342025273,0.811512834825538,2.7003999674239,0.721832238805369,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.992425680696705,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0.888970520090367,1.14596527667483,0,1.71072446022705,4.93571964975953,6.60754727256618,1.42913216315289,1.45770409648969,2.61576041299968,0.51336800074665,0.517086863031111,3.57656445851882,0,1.59562869950922,3.12022310734098,2.05765899409714,4.25547396069835,3.19706614819319,1.57275793023962,3.25572963234866,4.11620168390384,0.65147236858747,1.42156779497018,4.75171123760058,0,0,0.199945982364114,0,0,0,0.718874566474748,2.29723871668228,0,0.144781306667579,5.34238438630997,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,7.60687248658667,14.004774589671,4.06897535549603,0.207970861530807,0.535286966391485,0.473107245101804,0.35142424497814,0.601892199455438,0,3.10419213877515,2.65690239414175,1.29058417979192,1.99832313276591,5.286631251494,2.74514739048685,0,0,0,0,0,1.5119514666484,0.248107807818777,0,0,0.768834895534206,0.511707249066704,0,4.45254199334973,0.616838775210622,2.66342587969691,0.328508624055237,0,0.116210378459959,2.77976734060731,0.200506470303285,0.828728900423067,0.34444334449382,1.27463817604702,3.01586154406675,0.902399225814824,0.15403067420883,5.49044838423799,1.46139224653261,1.16106791782163,0,1.02056223165909,1.94324324491925,3.08454505380579,5.68987518842091,4.01351819083883,0,0,0.223874754722178,0,0.261435451024901,5.38545262744417,10.8244833080903,15.2927845492222,1.03041011647722,0.27470839445503,0,0,0,0,0.386682873168488,2.7728751080636,2.45605879561807,1.10269257987624,1.71872391789238,1.30515024522806,1.70453254832202,1.06838442776085,0.165284915360978,0,0.382838137483752,0.4046311234222,1.39453664789186,0.62962469366128,0.6970372701606,2.15623506123262,2.12922412126809,0,0.37064843820784,0.286249773483982,0.372158369359667,0.949138274156178,0.190630193923825,5.11795582622668,1.28381696410176,1.59101623962968,0,1.97859703341646,2.74537029736055,3.06312246098785,1.2130948894399,0,0.421258456238981,7.31450608634386,0.243713489631284,0,1.9109987597118,0.282810863907425,1.13008116620243,2.2054613741845,0,0,3.47265320560013,3.27947376023316,0.405820753925408,0.30982349809975,0.563391205064483,0.573645408816206,1.17898849215745,0,0.709522128141196,0.844430541190656,0.658589785919804,6.07157078025144,7.69856384538962,0.48111056362756,0.670302275535787,3.26672954583968,2.16530741786592,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0.185803175125719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| ||
|short_description=p2@NPW | |short_description=p2@NPW | ||
}} | }} |
Latest revision as of 02:21, 25 September 2015
Short description: | p2@NPW |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPW_5end |
Coexpression cluster: | C3541_neuroectodermal_carcinoid_osteosarcoma_neuroepithelioma_acute_gastrointestinal_peripheral |
Association with transcript: | 223bp_to_ENST00000329610, NM_001099456, uc002coh.3_5end |
EntrezGene: | NPW |
HGNC: | 30509 |
UniProt: | Q8N729 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 3.48e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.16e-09 | 160 |
entire embryonic mesenchyme | 9.16e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.04e-07 | 10 |