FFCP PHASE1:Hg19::chr22:42336209..42336228,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:42336209..42336228,-
|short_description=p3@CENPM
|description=CAGE_peak_3_at_CENPM_5end
|association_with_transcript=0bp_to_ENST00000472374,NM_001110215,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79019 | |EntrezGene=79019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18352 | |HGNC=18352 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSP4 | |UniProt=Q9NSP4 | ||
|association_with_transcript=0bp_to_ENST00000472374,NM_001110215,uc010gyq.2_5end | |||
|cluster_id=chr22:42336209..42336228,- | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_3_at_CENPM_5end | |||
|id=chr22:42336209..42336228,- | |||
|ontology_enrichment_celltype=CL:0000542!7.86e-43!53;CL:0000051!7.86e-43!53;CL:0000838!5.75e-42!52;CL:0000738!3.00e-26!140;CL:0002087!9.35e-23!119;CL:0000945!3.43e-22!24;CL:0000826!3.43e-22!24;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172;CL:0000988!6.05e-18!182;CL:0002031!9.44e-18!124;CL:0000084!2.24e-17!25;CL:0000827!2.24e-17!25;CL:0000791!2.89e-16!18;CL:0000789!2.89e-16!18;CL:0002420!2.89e-16!18;CL:0002419!2.89e-16!18;CL:0000790!2.89e-16!18;CL:0002032!3.02e-16!165;CL:0000837!3.02e-16!165;CL:0000236!1.33e-13!14;CL:0000625!1.61e-09!11;CL:0000624!2.92e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.70e-35;53!CL:0000945;3.14e-33;24!CL:0000791;3.58e-23;18!CL:0000789;3.58e-23;18!CL:0002419;3.58e-23;18!CL:0000084;3.29e-22;25!CL:0000236;4.72e-19;13!CL:0000624;1.49e-13;6!CL:0000625;2.06e-13;11!CL:0002087;4.62e-10;104!CL:0000623;7.66e-08;3!CL:0000898;2.23e-07;3!CL:0000226;5.08e-07;3!CL:0000842;5.08e-07;3!CL:0000767;8.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.43e-62,53;CL:0000051,6.43e-62,53;CL:0000838,2.15e-60,52;CL:0000945,2.68e-33,24;CL:0000826,2.68e-33,24;CL:0002087,1.24e-29,115;CL:0000738,5.40e-28,136;CL:0000791,2.83e-23,18;CL:0000789,2.83e-23,18;CL:0002420,2.83e-23,18;CL:0002419,2.83e-23,18;CL:0000790,2.83e-23,18;CL:0002031,2.52e-22,120;CL:0000084,2.80e-22,25;CL:0000827,2.80e-22,25;CL:0000236,1.06e-20,14;CL:0000037,8.43e-20,168;CL:0000988,5.95e-19,177;CL:0002032,5.05e-18,161;CL:0000837,5.05e-18,161;CL:0000624,1.44e-13,6;CL:0000625,1.70e-13,11;CL:0000623,7.67e-08,3;CL:0000825,7.67e-08,3;CL:0000898,2.14e-07,3;CL:0000226,4.98e-07,3;CL:0000842,4.98e-07,3;CL:0000767,7.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-35;53!CL:0000790;3.58e-23;18 | |||
|ontology_enrichment_disease=DOID:0060058!2.76e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.32e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.07e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.92e-14!15;UBERON:0000179!7.92e-14!15;UBERON:0000463!7.92e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-18;15!UBERON:0000179;1.07e-18;15!UBERON:0000463;1.07e-18;15!UBERON:0002390;7.40e-11;32!UBERON:0002193;1.73e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.36e-18,15;UBERON:0000179,1.36e-18,15;UBERON:0000463,1.36e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,3.69452652524756,3.85682828437028,10.2274711980715,13.4340289334024,2.94150634300544,0,0,0,2.94375362205146,3.69640004467296,0,4.9859586767869,15.0408335602606,9.76548918221333,0,0.32389366601898,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,12.3197371122926,12.561188059029,18.6796943311347,16.6424786800938,15.2150475073685,18.3920780785435,11.2377628373427,25.7594513724548,58.0597228491637,38.757654498482,67.6623613781655,0,3.92355994087075,0,31.2768534480995,42.838173139659,74.0165396398233,4.51403537554831,19.5553359980154,32.6678985956966,29.2240092611867,7.79873198196215,10.6058126690941,13.7351014641845,16.789839553431,8.71020974134591,9.10415432919148,2.30213066445147,1.38175008892924,1.44901542867526,14.3837966267199,10.4340922954988,11.4989076185474,2.49280553934646,18.7778041864941,29.2083328660235,24.5429101258918,3.50421955756506,2.60433381542567,1.90090408889675,6.17357988218868,2.43174561193395,0,2.8413270245282,0.821127996921047,66.5302252641617,63.9182067922583,52.2816098016904,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,39.6031828005874,59.5132106612268,44.4066905527929,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23688091430106,13.8057088523915,7.57765660404455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,3.82318603571188,5.12682468456746,1.66762242820452,2.05681136543097,3.24236655596359,4.32025149790492,7.13812658664843,0,0,0,2.22963810150862,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,1.12284324244932,0,0,1.22587722705226,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,1.39473591775749,6.90709788827869,0,0,9.96986924234663,0,0,0.358042349351218,0,2.17015492401254,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.461701551022782,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.176915129006678,1.22206028986725,1.48260564340311,0.741383633679017,0.104421949505455,0.134802265961354,0,0,0.547364367646998,1.76098157038881,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.698906672968121,0.343972064943233,0,0,0,1.35784623083787,0.0882561266915003,0,0,0,0,0.195551382734803,0,1.28071796843612,0,0.288180834308212,0.229073192331831,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,4.73197237702766,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,1.6087933092499,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,1.38823636338003,1.57204305099666,2.48543433208317,1.48849806543585,0.592834895693833,2.19226677085613,0,0,0,0,0,2.82697373250422,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.664324201566815,0.490696182767533,0,0,0,1.39991177098451,0,0.516644938982447,0.567515953566836,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,2.91788456504637,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.451261970095544,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0.127762427639595,0,0,0,0,0,5.5312314026774,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0.158013611732727,0.581207126840626,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0.975343399858155,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0,0.235676547101626,0,0,0,0,2.53756578545605,3.86747327841463,4.29746970477194,0.357107877211315,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,4.05144565611864,0.476128862927481,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| 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| ||
|short_description=p3@CENPM | |||
}} | }} |
Latest revision as of 22:56, 24 September 2015
Short description: | p3@CENPM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CENPM_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000472374, NM_001110215, uc010gyq.2_5end |
EntrezGene: | CENPM |
HGNC: | 18352 |
UniProt: | Q9NSP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.43e-62 | 53 |
common lymphoid progenitor | 6.43e-62 | 53 |
lymphoid lineage restricted progenitor cell | 2.15e-60 | 52 |
lymphocyte of B lineage | 2.68e-33 | 24 |
pro-B cell | 2.68e-33 | 24 |
nongranular leukocyte | 1.24e-29 | 115 |
leukocyte | 5.40e-28 | 136 |
mature alpha-beta T cell | 2.83e-23 | 18 |
alpha-beta T cell | 2.83e-23 | 18 |
immature T cell | 2.83e-23 | 18 |
mature T cell | 2.83e-23 | 18 |
immature alpha-beta T cell | 2.83e-23 | 18 |
hematopoietic lineage restricted progenitor cell | 2.52e-22 | 120 |
T cell | 2.80e-22 | 25 |
pro-T cell | 2.80e-22 | 25 |
B cell | 1.06e-20 | 14 |
hematopoietic stem cell | 8.43e-20 | 168 |
hematopoietic cell | 5.95e-19 | 177 |
hematopoietic oligopotent progenitor cell | 5.05e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-18 | 161 |
CD4-positive, alpha-beta T cell | 1.44e-13 | 6 |
CD8-positive, alpha-beta T cell | 1.70e-13 | 11 |
natural killer cell | 7.67e-08 | 3 |
pro-NK cell | 7.67e-08 | 3 |
naive T cell | 2.14e-07 | 3 |
single nucleate cell | 4.98e-07 | 3 |
mononuclear cell | 4.98e-07 | 3 |
basophil | 7.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.36e-18 | 15 |
haemolymphatic fluid | 1.36e-18 | 15 |
organism substance | 1.36e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.07e-08 | 10 |