FFCP PHASE1:Hg19::chr10:28271991..28272017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5Q9 | |UniProt=F5H5Q9 | ||
|association_with_transcript=349bp_to_ENST00000537576,uc010qdt.1_5end | |association_with_transcript=349bp_to_ENST00000537576,uc010qdt.1_5end | ||
|cluster_id=chr10:28271991..28272017,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_ARMC4_5end | |description=CAGE_peak_5_at_ARMC4_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0008947;6.10e-11;29 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0008947;6.10e-11;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@ARMC4 | |short_description=p5@ARMC4 | ||
}} | }} |
Latest revision as of 19:34, 17 September 2015
Short description: | p5@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARMC4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 349bp_to_ENST00000537576, uc010qdt.1_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | F5H5Q9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.85e-34 | 1 |
right lung lobe | 9.85e-34 | 1 |
lower lobe of lung | 9.85e-34 | 1 |
lobe of lung | 9.85e-34 | 1 |
right lung | 9.85e-34 | 1 |
open tracheal system trachea | 9.07e-18 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
thoracic cavity element | 1.93e-09 | 34 |
thoracic cavity | 1.93e-09 | 34 |
thoracic segment organ | 3.43e-09 | 35 |
respiratory primordium | 1.60e-08 | 38 |
endoderm of foregut | 1.60e-08 | 38 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
lung | 6.09e-07 | 22 |
respiratory tube | 6.09e-07 | 22 |
respiration organ | 6.09e-07 | 22 |
pair of lungs | 6.09e-07 | 22 |
lung primordium | 6.09e-07 | 22 |
lung bud | 6.09e-07 | 22 |