FFCP PHASE1:Hg19::chr3:149051346..149051364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116441 | |EntrezGene=116441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25181 | |HGNC=25181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_uc003exa.2_5end | |association_with_transcript=54bp_to_uc003exa.2_5end | ||
|cluster_id=chr3:149051346..149051364,- | |||
|coexpression_cluster_id=C328 | |coexpression_cluster_id=C328 | ||
|description=CAGE_peak_3_at_TM4SF18_5end | |description=CAGE_peak_3_at_TM4SF18_5end | ||
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|ontology_enrichment_celltype=CL:0002139!6.36e-25!24;CL:0000115!1.41e-21!35;CL:0000071!1.35e-18!18;CL:0002546!1.35e-18!18;CL:0002078!8.05e-17!44;CL:1000413!4.77e-10!9;CL:0000213!2.10e-09!57;CL:0000215!2.10e-09!57;CL:0005020!6.87e-08!6;CL:0002138!6.87e-08!6;CL:0005022!6.87e-08!6;CL:0002544!3.07e-07!6;CL:0002543!4.87e-07!6 | |ontology_enrichment_celltype=CL:0002139!6.36e-25!24;CL:0000115!1.41e-21!35;CL:0000071!1.35e-18!18;CL:0002546!1.35e-18!18;CL:0002078!8.05e-17!44;CL:1000413!4.77e-10!9;CL:0000213!2.10e-09!57;CL:0000215!2.10e-09!57;CL:0005020!6.87e-08!6;CL:0002138!6.87e-08!6;CL:0005022!6.87e-08!6;CL:0002544!3.07e-07!6;CL:0002543!4.87e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.27e-32;24!CL:0000115;6.78e-26;36!CL:0000071;3.67e-24;18!CL:0002078;2.03e-15;45!CL:1000413;7.44e-13;9!CL:0002138;5.22e-10;6!CL:0000213;9.72e-10;58!CL:0000215;9.72e-10;58!CL:0002544;3.95e-09;6!CL:0002543;9.11e-09;6 | |ontology_enrichment_celltype_v019=CL:0002139;1.27e-32;24!CL:0000115;6.78e-26;36!CL:0000071;3.67e-24;18!CL:0002078;2.03e-15;45!CL:1000413;7.44e-13;9!CL:0002138;5.22e-10;6!CL:0000213;9.72e-10;58!CL:0000215;9.72e-10;58!CL:0002544;3.95e-09;6!CL:0002543;9.11e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.56e-33,24;CL:0000115,9.35e-31,36;CL:0000071,2.75e-24,18;CL:0002546,2.75e-24,18;CL:0002078,6.03e-24,45;CL:0000213,6.60e-15,58;CL:0000215,6.60e-15,58;CL:1000413,7.09e-13,9;CL:0005020,5.29e-10,6;CL:0002138,5.29e-10,6;CL:0005022,5.29e-10,6;CL:0002544,3.87e-09,6;CL:0002543,7.14e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.67e-24;18!CL:0005022;5.22e-10;6 | |ontology_enrichment_development_v019=CL:0002546;3.67e-24;18!CL:0005022;5.22e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.91e-46!115;UBERON:0001049!3.41e-27!57;UBERON:0005068!3.41e-27!57;UBERON:0006241!3.41e-27!57;UBERON:0007135!3.41e-27!57;UBERON:0005743!9.48e-27!86;UBERON:0003075!3.33e-26!86;UBERON:0007284!3.33e-26!86;UBERON:0004111!9.78e-26!241;UBERON:0000025!1.18e-25!194;UBERON:0002616!1.37e-25!59;UBERON:0000477!5.57e-25!286;UBERON:0000073!8.37e-25!94;UBERON:0001016!8.37e-25!94;UBERON:0001017!2.40e-24!82;UBERON:0002346!5.03e-24!90;UBERON:0000955!6.10e-23!69;UBERON:0006238!6.10e-23!69;UBERON:0003080!1.18e-21!42;UBERON:0002780!6.15e-21!41;UBERON:0001890!6.15e-21!41;UBERON:0006240!6.15e-21!41;UBERON:0003056!3.47e-19!61;UBERON:0000119!5.89e-19!312;UBERON:0001986!1.35e-18!18;UBERON:0004638!1.35e-18!18;UBERON:0004852!1.35e-18!18;UBERON:0000483!2.32e-18!309;UBERON:0002020!3.37e-18!34;UBERON:0003528!3.37e-18!34;UBERON:0001893!1.29e-17!34;UBERON:0002791!5.10e-17!33;UBERON:0001869!1.75e-16!32;UBERON:0000153!7.34e-16!129;UBERON:0007811!7.34e-16!129;UBERON:0000487!1.15e-15!22;UBERON:0000033!6.10e-15!123;UBERON:0004121!4.97e-13!169;UBERON:0006914!7.86e-13!25;UBERON:0000467!1.47e-12!625;UBERON:0000480!1.92e-12!626;UBERON:0000924!3.44e-12!173;UBERON:0006601!3.44e-12!173;UBERON:0002619!3.64e-12!22;UBERON:0000956!6.88e-12!25;UBERON:0000203!6.88e-12!25;UBERON:0000468!7.70e-12!659;UBERON:0000481!9.49e-11!347;UBERON:0001950!1.42e-10!20;UBERON:0000064!2.74e-10!219;UBERON:0003915!4.77e-10!9;UBERON:0004700!4.77e-10!9;UBERON:0001917!4.77e-10!9;UBERON:0000475!5.32e-10!365;UBERON:0000922!4.71e-09!612;UBERON:0002308!4.05e-08!9;UBERON:0000125!4.05e-08!9;UBERON:0002049!4.97e-08!79;UBERON:0007798!4.97e-08!79;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0002298!8.56e-08!8;UBERON:0000062!8.59e-08!511;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0002420!1.86e-07!9;UBERON:0007245!1.86e-07!9;UBERON:0010009!1.86e-07!9;UBERON:0010011!1.86e-07!9;UBERON:0000454!1.86e-07!9;UBERON:0000055!3.83e-07!69;UBERON:0001009!7.26e-07!113;UBERON:0003076!8.69e-07!15;UBERON:0003057!8.69e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.91e-46!115;UBERON:0001049!3.41e-27!57;UBERON:0005068!3.41e-27!57;UBERON:0006241!3.41e-27!57;UBERON:0007135!3.41e-27!57;UBERON:0005743!9.48e-27!86;UBERON:0003075!3.33e-26!86;UBERON:0007284!3.33e-26!86;UBERON:0004111!9.78e-26!241;UBERON:0000025!1.18e-25!194;UBERON:0002616!1.37e-25!59;UBERON:0000477!5.57e-25!286;UBERON:0000073!8.37e-25!94;UBERON:0001016!8.37e-25!94;UBERON:0001017!2.40e-24!82;UBERON:0002346!5.03e-24!90;UBERON:0000955!6.10e-23!69;UBERON:0006238!6.10e-23!69;UBERON:0003080!1.18e-21!42;UBERON:0002780!6.15e-21!41;UBERON:0001890!6.15e-21!41;UBERON:0006240!6.15e-21!41;UBERON:0003056!3.47e-19!61;UBERON:0000119!5.89e-19!312;UBERON:0001986!1.35e-18!18;UBERON:0004638!1.35e-18!18;UBERON:0004852!1.35e-18!18;UBERON:0000483!2.32e-18!309;UBERON:0002020!3.37e-18!34;UBERON:0003528!3.37e-18!34;UBERON:0001893!1.29e-17!34;UBERON:0002791!5.10e-17!33;UBERON:0001869!1.75e-16!32;UBERON:0000153!7.34e-16!129;UBERON:0007811!7.34e-16!129;UBERON:0000487!1.15e-15!22;UBERON:0000033!6.10e-15!123;UBERON:0004121!4.97e-13!169;UBERON:0006914!7.86e-13!25;UBERON:0000467!1.47e-12!625;UBERON:0000480!1.92e-12!626;UBERON:0000924!3.44e-12!173;UBERON:0006601!3.44e-12!173;UBERON:0002619!3.64e-12!22;UBERON:0000956!6.88e-12!25;UBERON:0000203!6.88e-12!25;UBERON:0000468!7.70e-12!659;UBERON:0000481!9.49e-11!347;UBERON:0001950!1.42e-10!20;UBERON:0000064!2.74e-10!219;UBERON:0003915!4.77e-10!9;UBERON:0004700!4.77e-10!9;UBERON:0001917!4.77e-10!9;UBERON:0000475!5.32e-10!365;UBERON:0000922!4.71e-09!612;UBERON:0002308!4.05e-08!9;UBERON:0000125!4.05e-08!9;UBERON:0002049!4.97e-08!79;UBERON:0007798!4.97e-08!79;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0002298!8.56e-08!8;UBERON:0000062!8.59e-08!511;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0002420!1.86e-07!9;UBERON:0007245!1.86e-07!9;UBERON:0010009!1.86e-07!9;UBERON:0010011!1.86e-07!9;UBERON:0000454!1.86e-07!9;UBERON:0000055!3.83e-07!69;UBERON:0001009!7.26e-07!113;UBERON:0003076!8.69e-07!15;UBERON:0003057!8.69e-07!15 | ||
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| ||
|short_description=p3@TM4SF18 | |short_description=p3@TM4SF18 | ||
}} | }} |
Latest revision as of 21:14, 15 September 2015
Short description: | p3@TM4SF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM4SF18_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 54bp_to_uc003exa.2_5end |
EntrezGene: | TM4SF18 |
HGNC: | 25181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.56e-33 | 24 |
endothelial cell | 9.35e-31 | 36 |
blood vessel endothelial cell | 2.75e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.75e-24 | 18 |
meso-epithelial cell | 6.03e-24 | 45 |
lining cell | 6.60e-15 | 58 |
barrier cell | 6.60e-15 | 58 |
endothelial cell of artery | 7.09e-13 | 9 |
lymphangioblast | 5.29e-10 | 6 |
endothelial cell of lymphatic vessel | 5.29e-10 | 6 |
vascular lymphangioblast | 5.29e-10 | 6 |
aortic endothelial cell | 3.87e-09 | 6 |
vein endothelial cell | 7.14e-09 | 6 |