FFCP PHASE1:Hg19::chr10:65280796..65280817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221035 | |EntrezGene=221035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23711 | |HGNC=23711 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUK4 | |UniProt=Q6NUK4 | ||
|association_with_transcript=-305bp_to_ENST00000373758,NM_001001330,uc001jmt.2,uc009xpl.1_5end | |association_with_transcript=-305bp_to_ENST00000373758,NM_001001330,uc001jmt.2,uc009xpl.1_5end | ||
|cluster_id=chr10:65280796..65280817,+ | |||
|coexpression_cluster_id=C132 | |coexpression_cluster_id=C132 | ||
|description=CAGE_peak_13_at_REEP3_5end | |description=CAGE_peak_13_at_REEP3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!4.30e-08!254 | |ontology_enrichment_celltype=CL:0000066!4.30e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000317;4.42e-07;2!CL:1000448;4.42e-07;2!CL:0002308;4.42e-07;2!CL:0002097;4.42e-07;2!CL:0002140;4.42e-07;2!CL:0002535;4.42e-07;2 | |ontology_enrichment_celltype_v019=CL:0000317;4.42e-07;2!CL:1000448;4.42e-07;2!CL:0002308;4.42e-07;2!CL:0002097;4.42e-07;2!CL:0002140;4.42e-07;2!CL:0002535;4.42e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002097,4.17e-07,2;CL:0002535,4.42e-07,2;CL:0000317,4.69e-07,2;CL:1000448,4.69e-07,2;CL:0002308,4.69e-07,2;CL:0002140,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.60e-08!235;DOID:14566!6.89e-08!239;DOID:0050687!8.75e-08!143;DOID:305!3.46e-07!106 | |ontology_enrichment_disease=DOID:162!5.60e-08!235;DOID:14566!6.89e-08!239;DOID:0050687!8.75e-08!143;DOID:305!3.46e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:8692;2.62e-09;31!DOID:3350;4.42e-07;2 | |ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:8692;2.62e-09;31!DOID:3350;4.42e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,9.73e-13,1;DOID:8692,1.20e-09,31;DOID:1240,1.22e-07,39;DOID:3350,5.28e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.42e-07;2!UBERON:0007771;4.42e-07;2!UBERON:0003297;4.42e-07;2!UBERON:0001821;4.42e-07;2!UBERON:0006955;4.42e-07;2!UBERON:0003487;4.42e-07;2!UBERON:0004801;4.42e-07;2!UBERON:0001820;4.42e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;4.42e-07;2!UBERON:0007771;4.42e-07;2!UBERON:0003297;4.42e-07;2!UBERON:0001821;4.42e-07;2!UBERON:0006955;4.42e-07;2!UBERON:0003487;4.42e-07;2!UBERON:0004801;4.42e-07;2!UBERON:0001820;4.42e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.42e-07,2;UBERON:0004801,4.42e-07,2;UBERON:0002419,4.69e-07,2;UBERON:0007771,4.69e-07,2;UBERON:0003297,4.69e-07,2;UBERON:0001821,4.69e-07,2;UBERON:0003487,4.69e-07,2;UBERON:0001820,4.69e-07,2;UBERON:0005089,4.69e-07,2;UBERON:0005088,4.69e-07,2 | |||
|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.603173834469785,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.901029173531752,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.330037999682352,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53600108997424,0,8.60274140063682,8.94704431569664,8.00875880217161,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.20453736500431,0,0,1.52776196950456,0,6.13886844272246,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0.391969589657511,1.30588809870604,0,1.0319161948297,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0,0.240476460754601,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,1.5840050477911,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0.796191777397232,0,0,0,0,0.192619830407303,1.50109113962448,0,0,0,0.489473409012935,0.179088841081487,0.308801447160972,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.845248493434508,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.917142992608395,0,0.762764190934334,0,0.795664888465099,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,2.11339663594931,0.078493092850514,0,0,0,0,0,0,0,0.464965701472501,0,0,0.62164849248911,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.320965466756673,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.603173834469785,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.901029173531752,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.330037999682352,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53600108997424,0,8.60274140063682,8.94704431569664,8.00875880217161,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.20453736500431,0,0,1.52776196950456,0,6.13886844272246,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0.391969589657511,1.30588809870604,0,1.0319161948297,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0,0.240476460754601,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,1.5840050477911,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0.796191777397232,0,0,0,0,0.192619830407303,1.50109113962448,0,0,0,0.489473409012935,0.179088841081487,0.308801447160972,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.845248493434508,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.917142992608395,0,0.762764190934334,0,0.795664888465099,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,2.11339663594931,0.078493092850514,0,0,0,0,0,0,0,0.464965701472501,0,0,0.62164849248911,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.320965466756673,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p13@REEP3 | |short_description=p13@REEP3 | ||
}} | }} |
Latest revision as of 20:48, 18 September 2015
Short description: | p13@REEP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_REEP3_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | -305bp_to_ENST00000373758, NM_001001330, uc001jmt.2, uc009xpl.1_5end |
EntrezGene: | REEP3 |
HGNC: | 23711 |
UniProt: | Q6NUK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 4.17e-07 | 2 |
epithelial cell of cervix | 4.42e-07 | 2 |
sebum secreting cell | 4.69e-07 | 2 |
epithelial cell of sweat gland | 4.69e-07 | 2 |
epithelial cell of skin gland | 4.69e-07 | 2 |
acinar cell of sebaceous gland | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.42e-07 | 2 |
cervix epithelium | 4.42e-07 | 2 |
skin gland | 4.69e-07 | 2 |
epidermis gland | 4.69e-07 | 2 |
gland of integumental system | 4.69e-07 | 2 |
sebaceous gland | 4.69e-07 | 2 |
skin sebaceous gland | 4.69e-07 | 2 |
sweat gland | 4.69e-07 | 2 |
sweat gland placode | 4.69e-07 | 2 |
sebaceous gland placode | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.73e-13 | 1 |
myeloid leukemia | 1.20e-09 | 31 |
leukemia | 1.22e-07 | 39 |
mesenchymal cell neoplasm | 5.28e-07 | 2 |