FFCP PHASE1:Hg19::chr2:176981546..176981557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3236 | |EntrezGene=3236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5133 | |HGNC=5133 | ||
|TSSclassifier=strong | |||
|UniProt=P28358 | |UniProt=P28358 | ||
|association_with_transcript=54bp_to_NM_002148,uc002ukj.2_5end | |association_with_transcript=54bp_to_NM_002148,uc002ukj.2_5end | ||
|cluster_id=chr2:176981546..176981557,+ | |||
|coexpression_cluster_id=C2672 | |coexpression_cluster_id=C2672 | ||
|description=CAGE_peak_5_at_HOXD10_5end | |description=CAGE_peak_5_at_HOXD10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!7.31e-09!6;CL:0002138!7.31e-09!6;CL:0005022!7.31e-09!6 | |ontology_enrichment_celltype=CL:0005020!7.31e-09!6;CL:0002138!7.31e-09!6;CL:0005022!7.31e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002553;7.02e-13;1!CL:0000062;1.17e-11;9!CL:0002537;1.16e-09;5 | |ontology_enrichment_celltype_v019=CL:0002553;7.02e-13;1!CL:0000062;1.17e-11;9!CL:0002537;1.16e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.03e-13,1;CL:0002537,1.21e-09,5;CL:0000062,1.34e-09,11;CL:0000375,1.34e-09,11;CL:0000335,1.34e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.37e-10;10!CL:0000335;1.23e-09;11 | |ontology_enrichment_development_v019=UBERON:0005795;1.37e-10;10!CL:0000335;1.23e-09;11 | ||
|ontology_enrichment_disease=DOID:0060084!8.81e-11!3;DOID:127!8.81e-11!3;DOID:0060072!3.53e-08!4 | |ontology_enrichment_disease=DOID:0060084!8.81e-11!3;DOID:127!8.81e-11!3;DOID:0060072!3.53e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:1324;2.59e-07;15!DOID:1325;2.77e-07;7!DOID:3904;2.77e-07;7!DOID:0050615;6.95e-07;16 | |ontology_enrichment_disease_v019=DOID:1324;2.59e-07;15!DOID:1325;2.77e-07;7!DOID:3904;2.77e-07;7!DOID:0050615;6.95e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:1324,2.38e-07,15;DOID:1325,2.45e-07,7;DOID:3904,2.45e-07,7;DOID:0050615,6.41e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004175!3.58e-07!25;UBERON:0003133!3.93e-07!48;UBERON:0000059!4.41e-07!11;UBERON:0003127!7.39e-07!2;UBERON:0004876!9.70e-07!20 | |ontology_enrichment_uberon=UBERON:0004175!3.58e-07!25;UBERON:0003133!3.93e-07!48;UBERON:0000059!4.41e-07!11;UBERON:0003127!7.39e-07!2;UBERON:0004876!9.70e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.40e-12;1!UBERON:0006834;1.40e-12;1!UBERON:0002050;6.22e-10;5!UBERON:0005423;6.22e-10;5!UBERON:0000305;3.79e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0005795;1.40e-12;1!UBERON:0006834;1.40e-12;1!UBERON:0002050;6.22e-10;5!UBERON:0005423;6.22e-10;5!UBERON:0000305;3.79e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.57e-12,1;UBERON:0000305,3.91e-07,7 | |||
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| ||
|short_description=p5@HOXD10 | |short_description=p5@HOXD10 | ||
}} | }} |
Latest revision as of 08:57, 18 September 2015
Short description: | p5@HOXD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXD10_5end |
Coexpression cluster: | C2672_uterus_kidney_nonsmall_smallcell_breast_Osteoblast_Endothelial |
Association with transcript: | 54bp_to_NM_002148, uc002ukj.2_5end |
EntrezGene: | HOXD10 |
HGNC: | 5133 |
UniProt: | P28358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.03e-13 | 1 |
amnion mesenchymal stem cell | 1.21e-09 | 5 |
osteoblast | 1.34e-09 | 11 |
osteoprogenitor cell | 1.34e-09 | 11 |
mesenchyme condensation cell | 1.34e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.57e-12 | 1 |
amnion | 3.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.38e-07 | 15 |
bronchus cancer | 2.45e-07 | 7 |
bronchogenic carcinoma | 2.45e-07 | 7 |
respiratory system cancer | 6.41e-07 | 16 |