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MacroAPE 1083:Motif516: Difference between revisions

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107B8;0.204676!10850-111F4;0.222933!10851-111F5;0.604387!10852-111F6;0.157189!10853-111F7;0.21478!10854-111F8;0.563458!10855-111F9;0.165568!10856-111G1;0.203138!10847-111F1;0.227188!10846-111E9;0.218741!10848-111F2;0.230485!10845-111E8;0.676638!10857-111G2;0.821551!10858-111G3;0.329344!10156-103A3;0.306971!11901-125F2;0.5276!11902-125F3;0.88403!11903-125F4;0.846289!10689-109F5;0.921614!10648-109A9;0.911043!10784-110H1;0.614654!10744-110C6;0.66725!10772-110F7;0.921835!10474-106I6;0.763694!10600-108E6;0.997698!10684-109E9;0.638971!12226-129F3;0.135521!12227-129F4;0.231277!10508-107D4;0.501255!10539-107G8;0.235082!10607-108F4;0.31992!10555-107I6;0.213746!10774-110F9;0.237892!10637-108I7;0.541366!10663-109C6;0.221073!10728-110A8;0.350083!10729-110A9;0.357191!10430-106D7;0.228334!10730-110B1;0.508506!10813-111B3;0.619264!10812-111B2;0.530173!10037-101F1;0.411698!10172-103C1;0.609799!10163-103B1;0.473599!10076-102A4;0.49984!10073-102A1;0.613266!10036-101E9;0.39554!10195-103E6;0.612284!10277-104E7;0.564495!10434-106E2;0.551986!10550-107I1;0.294537!10545-107H5;0.377487!10544-107H4;0.207139!10704-109H2;0.745892!10510-107D6;0.988965!10558-107I9;0.287673!10020-101D2;0.659946!10732-110B3;0.90063!10049-101G4;0.18117!10698-109G5;0.99521!10437-106E5;0.271565!10417-106C3;0.411485!10035-101E8;0.234282!10171-103B9;0.703983!10157-103A4;0.524057!10034-101E7;0.49385!10072-101I9;0.610556!10199-103F1;0.423728!10200-103F2;0.11942!10697-109G4;0.445131!10723-110A3;0.340251!10179-103C8;0.231933!10160-103A7;0.275221!10180-103C9;0.26075!10162-103A9;0.694381!10021-101D3;0.612435!10840-111E3;0.084275!10706-109H4;0.739687!10033-101E6;0.769656!10032-101E5;0.764222!10490-107B4;0.646137!10439-106E7;0.61302!10022-101D4;0.120268!10176-103C5;0.460518!10469-106I1;0.342797!10067-101I4;0.264119!10411-106B6;0.64623!10471-106I3;0.136476!10030-101E3;0.872047!10475-106I7;0.787457!10787-110H4;0.466763!10477-106I9;0.195849!10695-109G2;0.415841!11771-123I7;0.582861!11772-123I8;0.513277!11773-123I9;0.627407!10093-102C3;0.35231!10442-106F1;0.211563!10442-106F1;0.189499!10201-103F3;0.199524!10639-108I9;0.748064!11843-124H7;0.0954674!11841-124H5;0.894843!10693-109F9;0.545683!10436-106E4;0.402425!10483-107A6;0.466194!10282-104F3;0.119703!10023-101D5;0.852915!10066-101I3;0.623897!10065-101I2;0.539363!10800-110I8;0.260004!10610-108F7;0.964885!10841-111E4;0.235243!10541-107H1;0.352056!10842-111E5;0.964969!10562-108A4;0.650855!10024-101D6;0.168625!10064-101I1;0.112683!10609-108F6;0.13836!10048-101G3;0.991208!10781-110G7;0.905265!10181-103D1;0.644192!10159-103A6;0.646469!10056-101H2;0.533217!10737-110B8;0.833637!10025-101D7;0.297121!10044-101F8;0.804598!10424-106D1;0.932387!10463-106H4;0.580912!10616-108G4;0.25429!10486-107A9;0.275559!10062-101H8;0.659736!10202-103F4;0.283447!10158-103A5;0.203621!10441-106E9;0.393794!10031-101E4;0.280713!10063-101H9;0.583172!10063-101H9;0.506282!11763-123H8;0.366943!11765-123I1;0.879435!11768-123I4;0.874697!10807-111A6;0.647576!10790-110H7;0.879981!10798-110I6;0.953933!10786-110H3;0.518042!10591-108D6;0.0987555!10593-108D8;0.741018!10590-108D5;0.249088!10026-101D8;0.573416!10096-102C6;0.536658!10168-103B6;0.886563!10154-103A1;0.408196!10209-103G2;0.38529!10061-101H7;0.124802!10027-101D9;0.130472!10043-101F7;0.243218!10783-110G9;0.60383!10028-101E1;0.1228!10060-101H6;0.279654!10203-103F5;0.179931!10059-101H5;0.0653637!10047-101G2;0.155239!10029-101E2;0.210767!10058-101H4;0.141523!10418-106C4;0.193305!10492-107B6;0.740935!10694-109G1;0.837739!10797-110I5;0.852007!10057-101H3;0.565479!10100-102D1;0.262547!10055-101H1;0.741594!10204-103F6;0.213821!10191-103E2;0.568238!10563-108A5;0.853561
|name=motif516
|name=motif516
|tomtom_result=Klf4#MA0039.2;2;0.00062838;0.299109;0.502562;7;CCCACCC;GCCCCACCCA;-!YPR022C#MA0436.1;1;0.00106198;0.505501;0.502562;6;CCCACCC;CCCCACG;+!SP1#MA0079.2;1;0.00266454;1.26832;0.557287;7;CCCACCC;CCCCGCCCCC;+!RPN4#MA0373.1;1;0.00289904;1.37994;0.557287;6;CCCACCC;CGCCACC;-!AFT2#MA0270.1;0;0.00294404;1.40136;0.557287;7;CCCACCC;CACACCCC;+!YGR067C#MA0425.1;2;0.00356781;1.69828;0.562801;7;CCCACCC;ACCCCACTTTTTTG;+!SP1#MA0079.2;2;0.00449654;2.14035;0.570003;7;CCCACCC;ACCCCGCCCC;-!RREB1#MA0073.1;6;0.00539764;2.56928;0.570003;7;CCCACCC;CCCCAAACCACCCCCCCCCC;+!YML081W#MA0431.1;2;0.00625197;2.97594;0.570003;7;CCCACCC;ACCCCGCAC;+!Egr1#MA0162.1;3;0.00667974;3.17956;0.570003;7;CCCACCC;CCGCCCACGCA;-!UGA3#MA0410.1;1;0.00675645;3.21607;0.570003;7;CCCACCC;TCCCGCCG;-!MIG2#MA0338.1;1;0.00722694;3.44002;0.570003;6;CCCACCC;CCCCGCA;+!MIG3#MA0339.1;1;0.00838427;3.99091;0.608641;6;CCCACCC;CCCCGCA;+!Macho-1#MA0118.1;1;0.00905291;4.30918;0.608641;7;CCCACCC;GAACCCCCA;-!ACE2#MA0267.1;0;0.00964601;4.5915;0.608641;7;CCCACCC;ACCAGCA;+!ADR1#MA0268.1;2;0.0121192;5.76872;0.716898;5;CCCACCC;ACCCCAC;+!btd#MA0443.1;0;0.013586;6.46692;0.73526;7;CCCACCC;TCCGCCCCCT;-!MET31#MA0333.1;1;0.0156075;7.42918;0.73526;7;CCCACCC;CGCCACACT;-!opa#MA0456.1;1;0.0159105;7.57338;0.73526;7;CCCACCC;GACCCCCCGCTG;+!DAL81#MA0290.1;3;0.0165417;7.87384;0.73526;7;CCCACCC;AATCCCGCCCGCGGCTTTT;-!ZNF354C#MA0130.1;1;0.0172677;8.21943;0.73526;5;CCCACCC;ATCCAC;+!Lag1#MA0193.1;-1;0.0172996;8.2346;0.73526;6;CCCACCC;CTACCAA;+!Pax4#MA0068.1;22;0.0185535;8.83145;0.73526;7;CCCACCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!Su(H)#MA0085.1;9;0.0190849;9.08441;0.73526;7;CCCACCC;ATCTCGGTTCCCACAA;-!Nkx3-2#MA0122.1;0;0.0194212;9.24451;0.73526;7;CCCACCC;TCCACTTAA;-
}}
}}

Latest revision as of 12:32, 7 September 2012

Full Name: motif516

Motif matrix
POACGT
0112803791182167622131
02013572800
03013572800
04135728000
05013572800
06013572800
0723514655441160935061

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.220.000628380.2991090.5025627CCCACCCGCCCCACCCA-
YPR022C#MA0436.110.001061980.5055010.5025626CCCACCCCCCCACG+
SP1#MA0079.210.002664541.268320.5572877CCCACCCCCCCGCCCCC+
RPN4#MA0373.110.002899041.379940.5572876CCCACCCCGCCACC-
AFT2#MA0270.100.002944041.401360.5572877CCCACCCCACACCCC+
YGR067C#MA0425.120.003567811.698280.5628017CCCACCCACCCCACTTTTTTG+
SP1#MA0079.220.004496542.140350.5700037CCCACCCACCCCGCCCC-
RREB1#MA0073.160.005397642.569280.5700037CCCACCCCCCCAAACCACCCCCCCCCC+
YML081W#MA0431.120.006251972.975940.5700037CCCACCCACCCCGCAC+
Egr1#MA0162.130.006679743.179560.5700037CCCACCCCCGCCCACGCA-
UGA3#MA0410.110.006756453.216070.5700037CCCACCCTCCCGCCG-
MIG2#MA0338.110.007226943.440020.5700036CCCACCCCCCCGCA+
MIG3#MA0339.110.008384273.990910.6086416CCCACCCCCCCGCA+
Macho-1#MA0118.110.009052914.309180.6086417CCCACCCGAACCCCCA-
ACE2#MA0267.100.009646014.59150.6086417CCCACCCACCAGCA+
ADR1#MA0268.120.01211925.768720.7168985CCCACCCACCCCAC+
btd#MA0443.100.0135866.466920.735267CCCACCCTCCGCCCCCT-
MET31#MA0333.110.01560757.429180.735267CCCACCCCGCCACACT-
opa#MA0456.110.01591057.573380.735267CCCACCCGACCCCCCGCTG+
DAL81#MA0290.130.01654177.873840.735267CCCACCCAATCCCGCCCGCGGCTTTT-
ZNF354C#MA0130.110.01726778.219430.735265CCCACCCATCCAC+
Lag1#MA0193.1-10.01729968.23460.735266CCCACCCCTACCAA+
Pax4#MA0068.1220.01855358.831450.735267CCCACCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
Su(H)#MA0085.190.01908499.084410.735267CCCACCCATCTCGGTTCCCACAA-
Nkx3-2#MA0122.100.01942129.244510.735267CCCACCCTCCACTTAA-
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