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MacroAPE 1083:PO6F1 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.0;4.999999999999998;2.0000000000000018;7.0!2;2.0000000000000018;0.0;11.999999999999998;0.0!3;0.0;14.0;0.0;0.0!4;14.0;0.0;0.0;0.0!5;0.99999...")
 
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.884075!10828-111C9;0.566253!10788-110H5;0.886396!10792-110H9;0.515443!10765-110E9;0.739674!10829-111D1;0.834741!10830-111D2;0.261451!10831-111D3;0.350327!10832-111D4;0.917174!10833-111D5;0.811623!10764-110E8;0.479957!10770-110F5;0.871327!10399-106A3;0.858115!10400-106A4;0.919971!10405-106A9;0.854001!10834-111D6;0.985749!10835-111D7;0.850923!10836-111D8;0.950989!10837-111D9;0.512017!10699-109G6;0.933156!10802-111A1;0.892278!10796-110I4;0.79433!10010-101C1;0.815235!10810-111A9;0.784786!10421-106C7;0.353549!10708-109H6;0.132669!12235-129G3;0.808179!12236-129G4;0.801623!12237-129G5;0.694363!10167-103B5;0.765661!10151-102I7;0.182834!10428-106D5;0.347658!10795-110I3;0.908348!10805-111A4;0.245318!10052-101G7;0.88637!10189-103D9;0.910696!10589-108D4;0.97885!10425-106D2;0.775646!10427-106D4;0.723985!10702-109G9;0.84265!10432-106D9;0.927055!10496-107C1;0.345299!10718-109I7;0.623175!10011-101C2;0.791458!10053-101G8;0.682584!10686-109F2;0.907142!10084-102B3;0.182932!10012-101C3;0.0368933!10085-102B4;0.168764!10482-107A5;0.119963!10419-106C5;0.744994!10080-102A8;0.66391!10760-110E4;0.765537!10709-109H7;0.0372646!10710-109H8;0.393029!10703-109H1;0.587643!10719-109I8;0.327018!10642-109A3;0.449811!10177-103C6;0.583592!10164-103B2;0.0988564!10173-103C2;0.216443!10166-103B4;0.062693!10083-102B2;0.189971!10188-103D8;0.0790787!10552-107I3;0.0588707!10553-107I4;0.762086!10013-101C4;0.936187!10536-107G5;0.953209!10618-108G6;0.392617!10423-106C9;0.244634!10785-110H2;0.409715!12238-129G6;0.940668!12239-129G7;0.752041!12240-129G8;0.572288!10416-106C2;0.791032!10801-110I9;0.456677!10766-110F1;0.558234!10824-111C5;0.546589!10825-111C6;0.935024!10826-111C7;0.914127!10454-106G4;0.710444!10409-106B4;0.887961!10638-108I8;0.434992!10636-108I6;0.634978!10513-107D9;0.0530225!10420-106C6;0.425945!10082-102B1;0.33116!10014-101C5;0.716167!10070-101I7;0.756539!10452-106G2;0.78741!10453-106G3;0.0612007!10449-106F8;0.0766247!10042-101F6;0.0635254!10069-101I6;0.00426909!10193-103E4;0.49613!10631-108I1;0.0286858!10438-106E6;0.0497726!10488-107B2;0.743829!10196-103E7;0.756268!10071-101I8;0.751197!10071-101I8;0.561122!10041-101F5;0.20737!10451-106G1;0.383883!10450-106F9;0.568705!10604-108F1;0.560699!10605-108F2;0.654921!10606-108F3;0.671482!10603-108E9;0.73949!10497-107C2;0.670425!10448-106F7;0.421738!10643-109A4;0.531618!10426-106D3;0.196274!10431-106D8;0.825031!10197-103E8;0.724929!10443-106F2;0.384318!10815-111B5;0.833033!10816-111B6;0.514452!10817-111B7;0.789213!10015-101C6;0.437609!10410-106B5;0.0889782!10054-101G9;0.642398!10758-110E2;0.513597!10711-109H9;0.679467!10040-101F4;0.190386!10470-106I2;0.153304!10415-106C1;0.736451!10198-103E9;0.720234!10614-108G2;0.293799!10612-108F9;0.129929!10549-107H9;0.935206!10615-108G3;0.186194!10487-107B1;0.847962!10433-106E1;0.905003!10688-109F4;0.158355!10444-106F3;0.261049!10444-106F3;0.895712!10485-107A8;0.864021!10413-106B8;0.000939205!10175-103C4;0.344689!10161-103A8;0.107632!12131-128D7;0.043779!10624-108H3;0.268161!10712-109I1;0.302205!10205-103F7;0.365943!10206-103F8;0.871153!10207-103F9;0.999641!10050-101G5;0.468465!10051-101G6;0.540887!10016-101C7;0.891694!10046-101G1;0.652025!10778-110G4;0.895662!10633-108I3;0.613334!10818-111B8;0.831866!10819-111B9;0.419032!10820-111C1;0.514096!10484-107A7;0.48316!10808-111A7;0.0829611!10169-103B7;0.302783!10153-102I9;0.323425!13425-144D5;0.205445!13433-144E4;0.974001!13437-144E8;0.763507!11904-125F5;0.639809!11905-125F6;0.679556!10039-101F3;0.863715!10791-110H8;0.13631!10017-101C8;0.511714!10045-101F9;0.294747!10509-107D5;0.268576!10839-111E2;0.357704!10692-109F8;0.0503381!10079-102A7;0.476817!10078-102A6;0.62312!10721-110A1;0.99239!10569-108B2;0.42994!10570-108B3;0.436883!10571-108B4;0.89404!10647-109A8;0.450575!10752-110D5;0.366737!10782-110G8;0.0966637!10726-110A6;0.58898!10018-101C9;0.206991!10086-102B5;0.940051!10182-103D2;0.846497!10165-103B3;0.0211939!10499-107C4;0.0202589!10408-106B3;0.607588!10019-101D1;0.928384!10068-101I5;0.704436!10075-102A3;0.7616!10077-102A5;0.634882!10727-110A7;0.0818276!10775-110G1;0.0218824!10412-106B7;0.268378!12231-129F8;0.322348!12232-129F9;0.612968!12233-129G1;0.772164!12234-129G2;0.954231!10414-106B9;0.685175!10170-103B8;0.97648!10183-103D3;0.159664!10150-102I6;0.250539!10174-103C3;0.24971!10155-103A2;0.0215621!10038-101F2;0.0348667!10838-111E1;0.0154471!10759-110E3;0.455225!10514-107E1;0.0996623!10465-106H6;0.644921!10691-109F7;0.0514563!10843-111E6;0.774734!10844-111E7;0.148086!11747-123G1;0.220831!11748-123G2;0.758873!11749-123G3;0.88245!11750-123G4;0.967618!11751-123G5;0.896006!11840-124H4;0.946754!11752-123G6;0.881883!11753-123G7;0.777419!11754-123G8;0.645671!11755-123G9;0.944568!11756-123H1;0.562167!11833-124G6;0.727365!11760-123H5;0.71842!11836-124G9;0.780906!11758-123H3;0.723353!11835-124G8;0.594432!11762-123H7;0.73779!11838-124H2;0.472599!11757-123H2;0.725507!11759-123H4;0.10763!11761-123H6;0.301296!11842-124H6;0.878574!11837-124H1;0.58103!10568-108B1;0.419382!13230-141I8;0.441737!13231-141I9;0.467571!10696-109G3;0.786253!10493-107B7;0.29399!10494-107B8;0.201324!10850-111F4;0.324557!10851-111F5;0.0771204!10852-111F6;0.00688412!10853-111F7;0.582021!10854-111F8;0.673394!10855-111F9;0.0699528!10856-111G1;0.444448!10847-111F1;0.0143152!10846-111E9;0.702707!10848-111F2;0.0738564!10845-111E8;0.374478!10857-111G2;0.764969!10858-111G3;0.133081!10156-103A3;0.811599!11901-125F2;0.218925!11902-125F3;0.726523!11903-125F4;0.950075!10689-109F5;0.944298!10648-109A9;0.871397!10784-110H1;0.164364!10744-110C6;0.860919!10772-110F7;0.0386168!10474-106I6;0.960945!10600-108E6;0.19318!10684-109E9;0.443411!12226-129F3;0.594872!12227-129F4;0.28048!10508-107D4;0.799746!10539-107G8;0.158969!10607-108F4;0.952694!10555-107I6;0.966129!10774-110F9;0.365678!10637-108I7;0.753178!10663-109C6;0.48438!10728-110A8;0.367347!10729-110A9;0.722311!10430-106D7;0.635254!10730-110B1;0.42874!10813-111B3;0.245776!10812-111B2;0.497844!10037-101F1;0.200334!10172-103C1;0.0799878!10163-103B1;0.44924!10076-102A4;0.245548!10073-102A1;0.0751099!10036-101E9;0.225794!10195-103E6;0.0748513!10277-104E7;0.167882!10434-106E2;0.0526785!10550-107I1;0.670484!10545-107H5;0.520518!10544-107H4;0.0122854!10704-109H2;0.529987!10510-107D6;0.795818!10558-107I9;0.483228!10020-101D2;0.797506!10732-110B3;0.476973!10049-101G4;0.472199!10698-109G5;0.699586!10437-106E5;0.906158!10417-106C3;0.53781!10035-101E8;0.263303!10171-103B9;0.095516!10157-103A4;0.16179!10034-101E7;0.240558!10072-101I9;0.0924263!10199-103F1;0.158692!10200-103F2;0.53613!10697-109G4;0.835686!10723-110A3;0.383612!10179-103C8;0.00692789!10160-103A7;0.197864!10180-103C9;0.209286!10162-103A9;0.14403!10021-101D3;0.179598!10840-111E3;0.553294!10706-109H4;0.203889!10033-101E6;0.431902!10032-101E5;0.0643174!10490-107B4;0.112704!10439-106E7;0.977368!10022-101D4;0.935398!10176-103C5;0.341569!10469-106I1;0.141576!10067-101I4;0.496951!10411-106B6;0.823856!10471-106I3;0.145283!10030-101E3;0.381873!10475-106I7;0.409933!10787-110H4;0.996687!10477-106I9;0.470681!10695-109G2;0.43312!11771-123I7;0.925812!11772-123I8;0.490515!11773-123I9;0.958158!10093-102C3;0.793386!10442-106F1;0.979386!10442-106F1;0.916558!10201-103F3;0.951628!10639-108I9;0.33569!11843-124H7;0.711961!11841-124H5;0.819905!10693-109F9;0.911346!10436-106E4;0.372697!10483-107A6;0.791746!10282-104F3;0.261094!10023-101D5;0.899692!10066-101I3;0.858003!10065-101I2;0.68441!10800-110I8;0.944745!10610-108F7;0.4838!10841-111E4;0.703064!10541-107H1;0.650688!10842-111E5;0.727564!10562-108A4;0.340967!10024-101D6;0.226039!10064-101I1;0.605914!10609-108F6;0.648157!10048-101G3;0.760465!10781-110G7;0.74561!10181-103D1;0.667079!10159-103A6;0.104571!10056-101H2;0.0692145!10737-110B8;0.122955!10025-101D7;0.917767!10044-101F8;0.433324!10424-106D1;0.638253!10463-106H4;0.243199!10616-108G4;0.937305!10486-107A9;0.631641!10062-101H8;0.352512!10202-103F4;0.918684!10158-103A5;0.632198!10441-106E9;0.0387637!10031-101E4;0.800541!10063-101H9;0.0743669!10063-101H9;0.238858!11763-123H8;0.856876!11765-123I1;0.541438!11768-123I4;0.790958!10807-111A6;0.783971!10790-110H7;0.696855!10798-110I6;0.936881!10786-110H3;0.835246!10591-108D6;0.857451!10593-108D8;0.58813!10590-108D5;0.85973!10026-101D8;0.907228!10096-102C6;0.736236!10168-103B6;0.0843168!10154-103A1;0.0443668!10209-103G2;0.0409515!10061-101H7;0.658753!10027-101D9;0.972304!10043-101F7;0.422734!10783-110G9;0.160623!10028-101E1;0.0944821!10060-101H6;0.409795!10203-103F5;0.995851!10059-101H5;0.224123!10047-101G2;0.424701!10029-101E2;0.0240853!10058-101H4;0.574299!10418-106C4;0.603676!10492-107B6;0.273484!10694-109G1;0.245275!10797-110I5;0.781925!10057-101H3;0.993965!10100-102D1;0.965305!10055-101H1;0.788671!10204-103F6;0.893036!10191-103E2;0.456363!10563-108A5;0.617991
|name=PO6F1_f1
|name=PO6F1_f1
|tomtom_result=SUM1#MA0398.1;-3;0.00154131;0.733663;0.786078;9;TGCATAAATTATG;AAAAATTTT;-!vvl#MA0254.1;0;0.00663318;3.15739;0.786078;6;TGCATAAATTATG;TGCATA;-!Prrx2#MA0075.1;-6;0.0100783;4.79728;0.786078;5;TGCATAAATTATG;AATTA;+!Foxq1#MA0040.1;-2;0.0107932;5.13758;0.786078;11;TGCATAAATTATG;AATAAACAATA;-!Lhx3#MA0135.1;-1;0.012047;5.73438;0.786078;12;TGCATAAATTATG;GATTAATTAATTT;-!HOXA5#MA0158.1;-2;0.0135415;6.44574;0.786078;8;TGCATAAATTATG;CACTAATT;+!CG32105#MA0178.1;-4;0.0144745;6.88988;0.786078;7;TGCATAAATTATG;TTAATTA;+!hb#MA0049.1;-1;0.0147884;7.03926;0.786078;10;TGCATAAATTATG;GCATAAAAAA;+!Abd-B#MA0165.1;-1;0.0162089;7.71542;0.786078;7;TGCATAAATTATG;TCATAAA;-!Lim1#MA0194.1;-4;0.0162089;7.71542;0.786078;7;TGCATAAATTATG;TTAATTA;+!al#MA0208.1;-4;0.0162089;7.71542;0.786078;7;TGCATAAATTATG;TTAATTA;-!STB3#MA0390.1;6;0.0169288;8.05812;0.786078;13;TGCATAAATTATG;CCAGAGTGAAAAATTTTGGAC;-!CG11294#MA0172.1;-4;0.0171295;8.15363;0.786078;7;TGCATAAATTATG;TTAATTA;+!repo#MA0240.1;-4;0.0201193;9.57681;0.786078;7;TGCATAAATTATG;TTAATTA;+
}}
}}

Latest revision as of 14:35, 7 September 2012

Full Name: PO6F1_f1

Motif matrix
POACGT
10.04.9999999999999982.00000000000000187.0
22.00000000000000180.011.9999999999999980.0
30.014.00.00.0
414.00.00.00.0
50.99999999999999960.00.013.000000000000007
614.00.00.00.0
711.9999999999999980.02.00000000000000180.0
89.0000000000000020.00.04.999999999999998
90.00.00.014.0
102.00000000000000180.00.011.999999999999998
1114.00.00.00.0
120.00.00.999999999999999613.000000000000007
132.00000000000000182.9999999999999967.02.0000000000000018

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SUM1#MA0398.1-30.001541310.7336630.7860789TGCATAAATTATGAAAAATTTT-
vvl#MA0254.100.006633183.157390.7860786TGCATAAATTATGTGCATA-
Prrx2#MA0075.1-60.01007834.797280.7860785TGCATAAATTATGAATTA+
Foxq1#MA0040.1-20.01079325.137580.78607811TGCATAAATTATGAATAAACAATA-
Lhx3#MA0135.1-10.0120475.734380.78607812TGCATAAATTATGGATTAATTAATTT-
HOXA5#MA0158.1-20.01354156.445740.7860788TGCATAAATTATGCACTAATT+
CG32105#MA0178.1-40.01447456.889880.7860787TGCATAAATTATGTTAATTA+
hb#MA0049.1-10.01478847.039260.78607810TGCATAAATTATGGCATAAAAAA+
Abd-B#MA0165.1-10.01620897.715420.7860787TGCATAAATTATGTCATAAA-
Lim1#MA0194.1-40.01620897.715420.7860787TGCATAAATTATGTTAATTA+
al#MA0208.1-40.01620897.715420.7860787TGCATAAATTATGTTAATTA-
STB3#MA0390.160.01692888.058120.78607813TGCATAAATTATGCCAGAGTGAAAAATTTTGGAC-
CG11294#MA0172.1-40.01712958.153630.7860787TGCATAAATTATGTTAATTA+
repo#MA0240.1-40.02011939.576810.7860787TGCATAAATTATGTTAATTA+
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