MacroAPE 1083:MLXPL f1: Difference between revisions
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0.675037!10789-110H6;0.030999!10828-111C9;0.0254595!10788-110H5;0.00450543!10792-110H9;0.143355!10765-110E9;0.0110222!10829-111D1;0.0335837!10830-111D2;0.00598672!10831-111D3;0.0126742!10832-111D4;0.436811!10833-111D5;0.0256347!10764-110E8;0.0658082!10770-110F5;0.165624!10399-106A3;0.00124039!10400-106A4;0.180991!10405-106A9;0.241932!10834-111D6;0.169906!10835-111D7;0.00601033!10836-111D8;0.160656!10837-111D9;0.451538!10699-109G6;0.223808!10802-111A1;0.0977323!10796-110I4;0.539276!10010-101C1;0.850614!10810-111A9;0.420504!10421-106C7;0.102226!10708-109H6;0.0593071!12235-129G3;0.350107!12236-129G4;0.317619!12237-129G5;0.764057!10167-103B5;0.664851!10151-102I7;0.454945!10428-106D5;0.339448!10795-110I3;0.330418!10805-111A4;0.0791058!10052-101G7;0.56241!10189-103D9;0.392152!10589-108D4;0.719898!10425-106D2;0.755059!10427-106D4;0.0248471!10702-109G9;0.550663!10432-106D9;0.877782!10496-107C1;0.718554!10718-109I7;0.254989!10011-101C2;0.181165!10053-101G8;0.479405!10686-109F2;0.395284!10084-102B3;0.049619!10012-101C3;0.521748!10085-102B4;0.453837!10482-107A5;0.331841!10419-106C5;0.789877!10080-102A8;0.75575!10760-110E4;0.0682462!10709-109H7;0.825036!10710-109H8;0.497135!10703-109H1;0.696479!10719-109I8;0.709622!10642-109A3;0.612751!10177-103C6;0.142103!10164-103B2;0.588626!10173-103C2;0.40308!10166-103B4;0.518991!10083-102B2;0.298975!10188-103D8;0.464536!10552-107I3;0.38388!10553-107I4;0.436876!10013-101C4;0.191091!10536-107G5;0.543274!10618-108G6;0.535707!10423-106C9;0.29537!10785-110H2;0.320476!12238-129G6;0.637814!12239-129G7;0.483402!12240-129G8;0.930314!10416-106C2;0.330198!10801-110I9;0.120946!10766-110F1;0.0158884!10824-111C5;0.0451649!10825-111C6;0.304608!10826-111C7;0.252427!10454-106G4;0.249068!10409-106B4;0.088928!10638-108I8;0.0676352!10636-108I6;0.658234!10513-107D9;0.33055!10420-106C6;0.705524!10082-102B1;0.7511!10014-101C5;0.644045!10070-101I7;0.686659!10452-106G2;0.321321!10453-106G3;0.378749!10449-106F8;0.246804!10042-101F6;0.295293!10069-101I6;0.557815!10193-103E4;0.23053!10631-108I1;0.491372!10438-106E6;0.202991!10488-107B2;0.948114!10196-103E7;0.650049!10071-101I8;0.96457!10071-101I8;0.564395!10041-101F5;0.324797!10451-106G1;0.472881!10450-106F9;0.755086!10604-108F1;0.382721!10605-108F2;0.138516!10606-108F3;0.108862!10603-108E9;0.194447!10497-107C2;0.016384!10448-106F7;0.219388!10643-109A4;0.307918!10426-106D3;0.559305!10431-106D8;0.834899!10197-103E8;0.231888!10443-106F2;0.860802!10815-111B5;0.510663!10816-111B6;0.838988!10817-111B7;0.88321!10015-101C6;0.907246!10410-106B5;0.654758!10054-101G9;0.498651!10758-110E2;0.515152!10711-109H9;0.451549!10040-101F4;0.977045!10470-106I2;0.427145!10415-106C1;0.2182!10198-103E9;0.399902!10614-108G2;0.516651!10612-108F9;0.307427!10549-107H9;0.484308!10615-108G3;0.262845!10487-107B1;0.799713!10433-106E1;0.0602262!10688-109F4;0.0552812!10444-106F3;0.292109!10444-106F3;0.0928105!10485-107A8;0.0262482!10413-106B8;0.101309!10175-103C4;0.181167!10161-103A8;0.548424!12131-128D7;0.422998!10624-108H3;0.443062!10712-109I1;0.00549713!10205-103F7;0.171142!10206-103F8;0.242961!10207-103F9;0.14083!10050-101G5;0.00989537!10051-101G6;0.593599!10016-101C7;0.241018!10046-101G1;0.0985002!10778-110G4;0.121851!10633-108I3;0.188914!10818-111B8;0.0855175!10819-111B9;0.54547!10820-111C1;0.49098!10484-107A7;0.499157!10808-111A7;0.296026!10169-103B7;0.158531!10153-102I9;0.390678!13425-144D5;0.357376!13433-144E4;0.549043!13437-144E8;0.706803!11904-125F5;0.792747!11905-125F6;0.826678!10039-101F3;0.944505!10791-110H8;0.386454!10017-101C8;0.84047!10045-101F9;0.798167!10509-107D5;0.349672!10839-111E2;0.952495!10692-109F8;0.244283!10079-102A7;0.0179454!10078-102A6;0.474635!10721-110A1;0.400854!10569-108B2;0.938311!10570-108B3;0.573987!10571-108B4;0.363625!10647-109A8;0.267121!10752-110D5;0.190003!10782-110G8;0.038959!10726-110A6;0.857417!10018-101C9;0.00645448!10086-102B5;0.163855!10182-103D2;0.336659!10165-103B3;0.276451!10499-107C4;0.416085!10408-106B3;0.295715!10019-101D1;0.128136!10068-101I5;0.473731!10075-102A3;0.24157!10077-102A5;0.339097!10727-110A7;0.171917!10775-110G1;0.128851!10412-106B7;0.11878!12231-129F8;0.659544!12232-129F9;0.133591!12233-129G1;0.449176!12234-129G2;0.837984!10414-106B9;0.700685!10170-103B8;0.887029!10183-103D3;0.362584!10150-102I6;0.466274!10174-103C3;0.40471!10155-103A2;0.473791!10038-101F2;0.562396!10838-111E1;0.426842!10759-110E3;0.720005!10514-107E1;0.0421902!10465-106H6;0.700083!10691-109F7;0.822705!10843-111E6;0.76089!10844-111E7;0.473428!11747-123G1;0.63663!11748-123G2;0.374671!11749-123G3;0.475085!11750-123G4;0.170426!11751-123G5;0.602257!11840-124H4;0.359306!11752-123G6;0.393224!11753-123G7;0.198292!11754-123G8;0.62827!11755-123G9;0.423798!11756-123H1;0.842879!11833-124G6;0.779492!11760-123H5;0.169591!11836-124G9;0.96657!11758-123H3;0.467872!11835-124G8;0.567927!11762-123H7;0.744999!11838-124H2;0.826475!11757-123H2;0.883406!11759-123H4;0.508426!11761-123H6;0.586227!11842-124H6;0.674999!11837-124H1;0.698522!10568-108B1;0.469119!13230-141I8;0.923241!13231-141I9;0.526341!10696-109G3;0.76138!10493-107B7;0.176289!10494-107B8;0.144436!10850-111F4;0.268315!10851-111F5;0.570609!10852-111F6;0.665588!10853-111F7;0.204336!10854-111F8;0.887662!10855-111F9;0.238789!10856-111G1;0.343766!10847-111F1;0.459443!10846-111E9;0.727498!10848-111F2;0.373325!10845-111E8;0.969508!10857-111G2;0.108755!10858-111G3;0.518753!10156-103A3;0.654082!11901-125F2;0.379347!11902-125F3;0.853368!11903-125F4;0.413248!10689-109F5;0.972496!10648-109A9;0.0604019!10784-110H1;0.547378!10744-110C6;0.24724!10772-110F7;0.204592!10474-106I6;0.0227677!10600-108E6;0.139998!10684-109E9;0.0415833!12226-129F3;0.472519!12227-129F4;0.966382!10508-107D4;0.231619!10539-107G8;0.766394!10607-108F4;0.923623!10555-107I6;0.850241!10774-110F9;0.944652!10637-108I7;0.807986!10663-109C6;0.980903!10728-110A8;0.828115!10729-110A9;0.880536!10430-106D7;0.17586!10730-110B1;0.709774!10813-111B3;0.59764!10812-111B2;0.197061!10037-101F1;0.873027!10172-103C1;0.357775!10163-103B1;0.48708!10076-102A4;0.344125!10073-102A1;0.398633!10036-101E9;0.288604!10195-103E6;0.376898!10277-104E7;0.415356!10434-106E2;0.559606!10550-107I1;0.379676!10545-107H5;0.706852!10544-107H4;0.999181!10704-109H2;0.389821!10510-107D6;0.198343!10558-107I9;0.117178!10020-101D2;0.531653!10732-110B3;0.569763!10049-101G4;0.996317!10698-109G5;0.246706!10437-106E5;0.578057!10417-106C3;0.805043!10035-101E8;0.588018!10171-103B9;0.384625!10157-103A4;0.42247!10034-101E7;0.33551!10072-101I9;0.355406!10199-103F1;0.300763!10200-103F2;0.504014!10697-109G4;0.628706!10723-110A3;0.339461!10179-103C8;0.0836072!10160-103A7;0.665055!10180-103C9;0.641305!10162-103A9;0.682427!10021-101D3;0.459593!10840-111E3;0.560707!10706-109H4;0.341179!10033-101E6;0.355626!10032-101E5;0.390632!10490-107B4;0.41106!10439-106E7;0.426114!10022-101D4;0.838378!10176-103C5;0.477026!10469-106I1;0.369671!10067-101I4;0.308091!10411-106B6;0.0919387!10471-106I3;0.825936!10030-101E3;0.0438199!10475-106I7;0.603197!10787-110H4;0.776656!10477-106I9;0.78669!10695-109G2;0.19285!11771-123I7;0.012811!11772-123I8;0.272946!11773-123I9;0.0640999!10093-102C3;0.0179353!10442-106F1;0.730478!10442-106F1;0.111605!10201-103F3;0.186669!10639-108I9;0.901813!11843-124H7;0.0145393!11841-124H5;0.0221079!10693-109F9;0.0990165!10436-106E4;0.200723!10483-107A6;0.369336!10282-104F3;0.828945!10023-101D5;0.880596!10066-101I3;0.826571!10065-101I2;0.353542!10800-110I8;0.646388!10610-108F7;0.602548!10841-111E4;0.430784!10541-107H1;0.951523!10842-111E5;0.697892!10562-108A4;0.518102!10024-101D6;0.58425!10064-101I1;0.811682!10609-108F6;0.691333!10048-101G3;0.709986!10781-110G7;0.299317!10181-103D1;0.473553!10159-103A6;0.463663!10056-101H2;0.578078!10737-110B8;0.395537!10025-101D7;0.115422!10044-101F8;0.423664!10424-106D1;0.64817!10463-106H4;0.47588!10616-108G4;0.126472!10486-107A9;0.587702!10062-101H8;0.43622!10202-103F4;0.109759!10158-103A5;0.585469!10441-106E9;0.807042!10031-101E4;0.117694!10063-101H9;0.409442!10063-101H9;0.280601!11763-123H8;0.814287!11765-123I1;0.709559!11768-123I4;0.800877!10807-111A6;0.952156!10790-110H7;0.0387991!10798-110I6;0.411923!10786-110H3;0.350613!10591-108D6;0.076038!10593-108D8;0.573186!10590-108D5;0.155263!10026-101D8;0.871723!10096-102C6;0.809536!10168-103B6;0.996602!10154-103A1;0.440841!10209-103G2;0.507732!10061-101H7;0.893127!10027-101D9;0.208394!10043-101F7;0.984686!10783-110G9;0.69253!10028-101E1;0.589488!10060-101H6;0.332747!10203-103F5;0.031433!10059-101H5;0.899571!10047-101G2;0.622717!10029-101E2;0.595126!10058-101H4;0.903847!10418-106C4;0.229384!10492-107B6;0.00873591!10694-109G1;0.745853!10797-110I5;0.00370399!10057-101H3;0.341797!10100-102D1;0.544034!10055-101H1;0.422384!10204-103F6;0.231831!10191-103E2;0.133904!10563-108A5;0.973952 | ||
|name=MLXPL_f1 | |name=MLXPL_f1 | ||
|tomtom_result=h#MA0449.1;1;5.80811e-05;0.0276466;0.018083;9;GCATGTGACACCGCCGTGG;GGCACGTGCC;+!INO2#MA0321.1;0;6.51089e-05;0.0309918;0.018083;9;GCATGTGACACCGCCGTGG;GCATGTGAA;+!CBF1#MA0281.1;0;9.17822e-05;0.0436883;0.018083;8;GCATGTGACACCGCCGTGG;GCACGTGA;+!Mycn#MA0104.2;1;0.000125083;0.0595397;0.018083;9;GCATGTGACACCGCCGTGG;CGCACGTGGC;+!INO4#MA0322.1;0;0.000130767;0.0622452;0.018083;9;GCATGTGACACCGCCGTGG;GCATGTGAA;+!Myc#MA0147.1;1;0.00013577;0.0646264;0.018083;9;GCATGTGACACCGCCGTGG;CGCACGTGGC;+!PHO4#MA0357.1;0;0.000177856;0.0846596;0.0184244;8;GCATGTGACACCGCCGTGG;GCACGTGC;+!Mycn#MA0104.2;-1;0.000238757;0.113648;0.0222598;6;GCATGTGACACCGCCGTGG;CACGTG;-!Arnt#MA0004.1;-1;0.000435508;0.207302;0.032854;6;GCATGTGACACCGCCGTGG;CACGTG;+!USF1#MA0093.1;-1;0.000458105;0.218058;0.032854;7;GCATGTGACACCGCCGTGG;CACGTGG;+!TYE7#MA0409.1;-1;0.000721684;0.343521;0.0448562;7;GCATGTGACACCGCCGTGG;CACGTGA;+!MAX#MA0058.1;0;0.000965723;0.459684;0.0562729;10;GCATGTGACACCGCCGTGG;TCACGTGGTC;-!AFT1#MA0269.1;2;0.0017225;0.819908;0.089218;19;GCATGTGACACCGCCGTGG;TTACATATTGCACCCGATTGG;+!HIF1A::ARNT#MA0259.1;0;0.00226151;1.07648;0.110971;8;GCATGTGACACCGCCGTGG;GGACGTGC;+!MYC::MAX#MA0059.1;2;0.002894;1.37754;0.134907;9;GCATGTGACACCGCCGTGG;GAGCACGTGGT;+!RTG3#MA0376.1;6;0.00396089;1.88539;0.175849;14;GCATGTGACACCGCCGTGG;GACTAAGCACGTGCTAATAT;-!HAC1#MA0310.1;-1;0.00528459;2.51546;0.197078;8;GCATGTGACACCGCCGTGG;CACGTGTC;-!sna#MA0086.1;-1;0.00675106;3.2135;0.2271;6;GCATGTGACACCGCCGTGG;CAGGTG;+!TFAP2A#MA0003.1;0;0.0111371;5.30124;0.346111;9;GCATGTGACACCGCCGTGG;CCCCCGGGC;-!opa#MA0456.1;-6;0.0139008;6.61678;0.405001;12;GCATGTGACACCGCCGTGG;GACCCCCCGCTG;+!Arnt::Ahr#MA0006.1;-12;0.0143879;6.84862;0.406489;6;GCATGTGACACCGCCGTGG;TGCGTG;+!NRG1#MA0347.1;1;0.0172866;8.22844;0.474022;19;GCATGTGACACCGCCGTGG;TGCGATGGACCCTGATCTAG;-!Su(H)#MA0085.1;-2;0.0186737;8.8887;0.497427;16;GCATGTGACACCGCCGTGG;CTGTGGGAAACGAGAT;+!SUT1#MA0399.1;-11;0.0193916;9.23041;0.502201;7;GCATGTGACACCGCCGTGG;CCCCGCG;-!ZEB1#MA0103.1;-1;0.0207599;9.8817;0.515656;6;GCATGTGACACCGCCGTGG;CAGGTG;- | |||
}} | }} |
Latest revision as of 14:58, 7 September 2012
Full Name: MLXPL_f1
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
h#MA0449.1 | 1 | 5.80811e-05 | 0.0276466 | 0.018083 | 9 | GCATGTGACACCGCCGTGG | GGCACGTGCC | + |
INO2#MA0321.1 | 0 | 6.51089e-05 | 0.0309918 | 0.018083 | 9 | GCATGTGACACCGCCGTGG | GCATGTGAA | + |
CBF1#MA0281.1 | 0 | 9.17822e-05 | 0.0436883 | 0.018083 | 8 | GCATGTGACACCGCCGTGG | GCACGTGA | + |
Mycn#MA0104.2 | 1 | 0.000125083 | 0.0595397 | 0.018083 | 9 | GCATGTGACACCGCCGTGG | CGCACGTGGC | + |
INO4#MA0322.1 | 0 | 0.000130767 | 0.0622452 | 0.018083 | 9 | GCATGTGACACCGCCGTGG | GCATGTGAA | + |
Myc#MA0147.1 | 1 | 0.00013577 | 0.0646264 | 0.018083 | 9 | GCATGTGACACCGCCGTGG | CGCACGTGGC | + |
PHO4#MA0357.1 | 0 | 0.000177856 | 0.0846596 | 0.0184244 | 8 | GCATGTGACACCGCCGTGG | GCACGTGC | + |
Mycn#MA0104.2 | -1 | 0.000238757 | 0.113648 | 0.0222598 | 6 | GCATGTGACACCGCCGTGG | CACGTG | - |
Arnt#MA0004.1 | -1 | 0.000435508 | 0.207302 | 0.032854 | 6 | GCATGTGACACCGCCGTGG | CACGTG | + |
USF1#MA0093.1 | -1 | 0.000458105 | 0.218058 | 0.032854 | 7 | GCATGTGACACCGCCGTGG | CACGTGG | + |
TYE7#MA0409.1 | -1 | 0.000721684 | 0.343521 | 0.0448562 | 7 | GCATGTGACACCGCCGTGG | CACGTGA | + |
MAX#MA0058.1 | 0 | 0.000965723 | 0.459684 | 0.0562729 | 10 | GCATGTGACACCGCCGTGG | TCACGTGGTC | - |
AFT1#MA0269.1 | 2 | 0.0017225 | 0.819908 | 0.089218 | 19 | GCATGTGACACCGCCGTGG | TTACATATTGCACCCGATTGG | + |
HIF1A::ARNT#MA0259.1 | 0 | 0.00226151 | 1.07648 | 0.110971 | 8 | GCATGTGACACCGCCGTGG | GGACGTGC | + |
MYC::MAX#MA0059.1 | 2 | 0.002894 | 1.37754 | 0.134907 | 9 | GCATGTGACACCGCCGTGG | GAGCACGTGGT | + |
RTG3#MA0376.1 | 6 | 0.00396089 | 1.88539 | 0.175849 | 14 | GCATGTGACACCGCCGTGG | GACTAAGCACGTGCTAATAT | - |
HAC1#MA0310.1 | -1 | 0.00528459 | 2.51546 | 0.197078 | 8 | GCATGTGACACCGCCGTGG | CACGTGTC | - |
sna#MA0086.1 | -1 | 0.00675106 | 3.2135 | 0.2271 | 6 | GCATGTGACACCGCCGTGG | CAGGTG | + |
TFAP2A#MA0003.1 | 0 | 0.0111371 | 5.30124 | 0.346111 | 9 | GCATGTGACACCGCCGTGG | CCCCCGGGC | - |
opa#MA0456.1 | -6 | 0.0139008 | 6.61678 | 0.405001 | 12 | GCATGTGACACCGCCGTGG | GACCCCCCGCTG | + |
Arnt::Ahr#MA0006.1 | -12 | 0.0143879 | 6.84862 | 0.406489 | 6 | GCATGTGACACCGCCGTGG | TGCGTG | + |
NRG1#MA0347.1 | 1 | 0.0172866 | 8.22844 | 0.474022 | 19 | GCATGTGACACCGCCGTGG | TGCGATGGACCCTGATCTAG | - |
Su(H)#MA0085.1 | -2 | 0.0186737 | 8.8887 | 0.497427 | 16 | GCATGTGACACCGCCGTGG | CTGTGGGAAACGAGAT | + |
SUT1#MA0399.1 | -11 | 0.0193916 | 9.23041 | 0.502201 | 7 | GCATGTGACACCGCCGTGG | CCCCGCG | - |
ZEB1#MA0103.1 | -1 | 0.0207599 | 9.8817 | 0.515656 | 6 | GCATGTGACACCGCCGTGG | CAGGTG | - |