MacroAPE 1083:TOPORS: Difference between revisions
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!10717-109I6;0.161688!10455-106G5;0.758049!10534-107G3;0.000950926!10429-106D6;0.0407121!10464-106H5;0.0175659!10827-111C8;0.0254828!10789-110H6;0.00236161!10828-111C9;0.0476718!10788-110H5;0.0015056!10792-110H9;0.0576984!10765-110E9;0.151923!10829-111D1;0.0104541!10830-111D2;0.00166262!10831-111D3;0.00886734!10832-111D4;0.00920045!10833-111D5;0.00389641!10764-110E8;0.0010394!10770-110F5;0.0822185!10399-106A3;0.00599356!10400-106A4;0.0154886!10405-106A9;0.0153986!10834-111D6;0.019689!10835-111D7;0.0171542!10836-111D8;0.0135366!10837-111D9;0.040885!10699-109G6;0.00748359!10802-111A1;0.0141904!10796-110I4;0.00262733!10010-101C1;0.0717386!10810-111A9;0.0355947!10421-106C7;0.219494!10708-109H6;0.00975776!12235-129G3;0.618686!12236-129G4;0.786386!12237-129G5;0.83471!10167-103B5;0.946044!10151-102I7;0.094107!10428-106D5;0.123423!10795-110I3;0.297608!10805-111A4;0.0642179!10052-101G7;0.0315731!10189-103D9;0.0127665!10589-108D4;0.0415138!10425-106D2;0.283116!10427-106D4;0.994925!10702-109G9;7.51959e-06!10432-106D9;0.224961!10496-107C1;0.0366471!10718-109I7;0.0191372!10011-101C2;0.0104568!10053-101G8;0.0195912!10686-109F2;0.597243!10084-102B3;0.657982!10012-101C3;0.111769!10085-102B4;0.078057!10482-107A5;0.332731!10419-106C5;0.117292!10080-102A8;0.0133302!10760-110E4;0.036023!10709-109H7;0.131917!10710-109H8;0.0110116!10703-109H1;0.13645!10719-109I8;0.149954!10642-109A3;0.708437!10177-103C6;0.12135!10164-103B2;0.137794!10173-103C2;0.0872385!10166-103B4;0.423126!10083-102B2;0.4227!10188-103D8;0.456669!10552-107I3;0.0622042!10553-107I4;0.129388!10013-101C4;0.695884!10536-107G5;0.00522418!10618-108G6;0.081534!10423-106C9;0.0423393!10785-110H2;0.039594!12238-129G6;0.0428838!12239-129G7;0.190425!12240-129G8;0.106059!10416-106C2;0.373192!10801-110I9;0.0603438!10766-110F1;0.00113751!10824-111C5;0.104946!10825-111C6;0.0222943!10826-111C7;0.0158686!10454-106G4;0.0161958!10409-106B4;0.0198644!10638-108I8;0.0286629!10636-108I6;0.0230328!10513-107D9;0.132794!10420-106C6;0.0118953!10082-102B1;0.0726322!10014-101C5;0.0328394!10070-101I7;0.0176858!10452-106G2;0.0286094!10453-106G3;0.0866225!10449-106F8;0.0379625!10042-101F6;0.0299649!10069-101I6;0.0216918!10193-103E4;0.0191387!10631-108I1;0.0852674!10438-106E6;0.000414442!10488-107B2;0.4468!10196-103E7;0.133944!10071-101I8;0.0568429!10071-101I8;0.0140973!10041-101F5;0.295256!10451-106G1;0.0282938!10450-106F9;0.17479!10604-108F1;0.107145!10605-108F2;0.302929!10606-108F3;0.558949!10603-108E9;0.238026!10497-107C2;0.271569!10448-106F7;0.931793!10643-109A4;0.417843!10426-106D3;0.243431!10431-106D8;0.155145!10197-103E8;0.0829628!10443-106F2;0.0102091!10815-111B5;0.875792!10816-111B6;0.297824!10817-111B7;0.273804!10015-101C6;0.291288!10410-106B5;0.0122685!10054-101G9;0.298527!10758-110E2;0.0268959!10711-109H9;0.0136985!10040-101F4;0.069656!10470-106I2;0.120234!10415-106C1;0.606783!10198-103E9;0.112687!10614-108G2;0.00319813!10612-108F9;0.791032!10549-107H9;0.157325!10615-108G3;0.232156!10487-107B1;0.104726!10433-106E1;0.0832831!10688-109F4;0.451749!10444-106F3;0.320755!10444-106F3;0.861339!10485-107A8;0.818174!10413-106B8;0.122049!10175-103C4;0.346055!10161-103A8;0.0731353!12131-128D7;0.0431706!10624-108H3;0.0196619!10712-109I1;0.82777!10205-103F7;0.00633577!10206-103F8;0.0064954!10207-103F9;0.0365665!10050-101G5;0.0402989!10051-101G6;0.0512106!10016-101C7;0.127199!10046-101G1;0.0651324!10778-110G4;0.018083!10633-108I3;0.414691!10818-111B8;0.200242!10819-111B9;0.0994479!10820-111C1;0.118462!10484-107A7;0.131726!10808-111A7;0.0524219!10169-103B7;0.000188739!10153-102I9;0.163399!13425-144D5;0.0820237!13433-144E4;0.119489!13437-144E8;0.20496!11904-125F5;0.0703685!11905-125F6;0.00265399!10039-101F3;0.0172822!10791-110H8;0.120156!10017-101C8;0.199748!10045-101F9;0.101271!10509-107D5;0.0298746!10839-111E2;0.124664!10692-109F8;0.20614!10079-102A7;0.251617!10078-102A6;0.0147585!10721-110A1;0.092005!10569-108B2;0.204717!10570-108B3;0.0662363!10571-108B4;0.108218!10647-109A8;0.062737!10752-110D5;0.624727!10782-110G8;0.00085238!10726-110A6;0.850819!10018-101C9;0.500255!10086-102B5;0.331577!10182-103D2;0.668152!10165-103B3;0.0528843!10499-107C4;0.062152!10408-106B3;0.288242!10019-101D1;0.287665!10068-101I5;0.014607!10075-102A3;0.0098983!10077-102A5;0.0662697!10727-110A7;0.4938!10775-110G1;0.00279577!10412-106B7;0.0156397!12231-129F8;0.346898!12232-129F9;0.486072!12233-129G1;0.284758!12234-129G2;0.513011!10414-106B9;0.323509!10170-103B8;0.0284958!10183-103D3;0.212002!10150-102I6;0.124049!10174-103C3;0.141045!10155-103A2;0.0325165!10038-101F2;0.0440691!10838-111E1;0.0241347!10759-110E3;0.566857!10514-107E1;0.3302!10465-106H6;0.217675!10691-109F7;0.895649!10843-111E6;0.155694!10844-111E7;0.0462189!11747-123G1;0.254054!11748-123G2;0.181286!11749-123G3;0.153582!11750-123G4;0.0176111!11751-123G5;0.0583154!11840-124H4;0.0317207!11752-123G6;0.025869!11753-123G7;0.131238!11754-123G8;0.0162412!11755-123G9;0.123641!11756-123H1;0.0886389!11833-124G6;0.294187!11760-123H5;0.0961783!11836-124G9;0.223389!11758-123H3;0.0716049!11835-124G8;0.255284!11762-123H7;0.0910085!11838-124H2;0.125364!11757-123H2;0.0393116!11759-123H4;0.226804!11761-123H6;0.207354!11842-124H6;0.135279!11837-124H1;0.239229!10568-108B1;0.158556!13230-141I8;0.668748!13231-141I9;0.0616601!10696-109G3;0.104801!10493-107B7;0.360005!10494-107B8;0.428291!10850-111F4;0.0683584!10851-111F5;0.0655365!10852-111F6;0.176154!10853-111F7;0.890555!10854-111F8;0.0416886!10855-111F9;0.268654!10856-111G1;0.0128237!10847-111F1;0.304021!10846-111E9;0.319061!10848-111F2;0.409089!10845-111E8;0.142892!10857-111G2;0.107865!10858-111G3;0.067328!10156-103A3;0.357982!11901-125F2;0.114933!11902-125F3;0.000570963!11903-125F4;8.71738e-05!10689-109F5;0.00171084!10648-109A9;0.540856!10784-110H1;0.156714!10744-110C6;0.100486!10772-110F7;0.00119357!10474-106I6;0.0254259!10600-108E6;0.00425951!10684-109E9;0.18317!12226-129F3;0.860812!12227-129F4;0.19177!10508-107D4;0.599993!10539-107G8;0.224641!10607-108F4;0.641905!10555-107I6;0.430249!10774-110F9;0.11774!10637-108I7;0.543868!10663-109C6;0.218235!10728-110A8;0.95452!10729-110A9;0.715494!10430-106D7;0.688869!10730-110B1;0.00841397!10813-111B3;0.312502!10812-111B2;0.0911362!10037-101F1;0.249108!10172-103C1;0.0780752!10163-103B1;0.214554!10076-102A4;0.105108!10073-102A1;0.125483!10036-101E9;0.332654!10195-103E6;0.127996!10277-104E7;0.0807486!10434-106E2;0.00450674!10550-107I1;0.0860928!10545-107H5;0.183093!10544-107H4;0.304031!10704-109H2;0.047735!10510-107D6;0.351621!10558-107I9;0.305066!10020-101D2;0.871793!10732-110B3;0.00469229!10049-101G4;0.812037!10698-109G5;0.429526!10437-106E5;0.17296!10417-106C3;0.473928!10035-101E8;0.175417!10171-103B9;0.108254!10157-103A4;0.111914!10034-101E7;0.149256!10072-101I9;0.0989866!10199-103F1;0.341993!10200-103F2;0.0819977!10697-109G4;0.0329691!10723-110A3;0.478144!10179-103C8;0.0703994!10160-103A7;0.0804737!10180-103C9;0.149574!10162-103A9;0.427173!10021-101D3;0.448547!10840-111E3;0.00065563!10706-109H4;0.000277049!10033-101E6;0.268525!10032-101E5;0.0703668!10490-107B4;0.133745!10439-106E7;0.196516!10022-101D4;0.024214!10176-103C5;0.0144499!10469-106I1;0.0887637!10067-101I4;0.0217289!10411-106B6;0.00859581!10471-106I3;0.397587!10030-101E3;0.112458!10475-106I7;0.0791718!10787-110H4;0.0349951!10477-106I9;0.0406898!10695-109G2;0.531132!11771-123I7;0.149594!11772-123I8;0.905338!11773-123I9;0.0925495!10093-102C3;0.161194!10442-106F1;0.0349597!10442-106F1;0.963769!10201-103F3;0.796233!10639-108I9;0.0400923!11843-124H7;0.667069!11841-124H5;0.183839!10693-109F9;0.219389!10436-106E4;0.131676!10483-107A6;0.0540662!10282-104F3;0.11826!10023-101D5;0.149332!10066-101I3;0.124294!10065-101I2;0.015498!10800-110I8;0.00709327!10610-108F7;0.133998!10841-111E4;0.266886!10541-107H1;0.169203!10842-111E5;0.00632693!10562-108A4;0.137192!10024-101D6;0.66804!10064-101I1;0.0858922!10609-108F6;0.0382023!10048-101G3;0.81066!10781-110G7;0.123286!10181-103D1;0.328356!10159-103A6;0.0139469!10056-101H2;0.0315783!10737-110B8;0.0260094!10025-101D7;0.493116!10044-101F8;0.250987!10424-106D1;0.0638516!10463-106H4;0.000122934!10616-108G4;0.06811!10486-107A9;0.152723!10062-101H8;0.00247083!10202-103F4;0.0395364!10158-103A5;0.00673193!10441-106E9;0.020717!10031-101E4;0.198569!10063-101H9;0.105562!10063-101H9;0.443289!11763-123H8;0.011209!11765-123I1;0.0815088!11768-123I4;0.0623921!10807-111A6;0.0792413!10790-110H7;0.170035!10798-110I6;0.129786!10786-110H3;0.756362!10591-108D6;0.18936!10593-108D8;0.142701!10590-108D5;0.230425!10026-101D8;0.155747!10096-102C6;0.00427991!10168-103B6;0.295617!10154-103A1;0.0871487!10209-103G2;0.0534514!10061-101H7;0.0125517!10027-101D9;0.0201349!10043-101F7;0.781525!10783-110G9;0.350614!10028-101E1;0.343023!10060-101H6;0.0497922!10203-103F5;0.0401285!10059-101H5;0.0123213!10047-101G2;0.00844534!10029-101E2;0.133742!10058-101H4;0.00630795!10418-106C4;0.00926484!10492-107B6;0.0142977!10694-109G1;0.781613!10797-110I5;0.275638!10057-101H3;0.0929189!10100-102D1;0.00699254!10055-101H1;0.00206151!10204-103F6;0.00539193!10191-103E2;0.0718937!10563-108A5;0.0186906 | ||
|name=TOPORS | |name=TOPORS | ||
|tomtom_result=ACE2#MA0267.1;-1;0.00247989;1.18043;1;7;TCCCAGCTACTTTGGGA;ACCAGCA;+!CRZ1#MA0285.1;-1;0.00639935;3.04609;1;9;TCCCAGCTACTTTGGGA;CTAAGCCAC;+!NHLH1#MA0048.1;0;0.00706518;3.36303;1;12;TCCCAGCTACTTTGGGA;GCGCAGCTGCGT;+!YGR067C#MA0425.1;0;0.00912306;4.34258;1;14;TCCCAGCTACTTTGGGA;ACCCCACTTTTTTG;+!SWI5#MA0402.1;0;0.00989572;4.71036;1;8;TCCCAGCTACTTTGGGA;AACCAGCA;-!GABPA#MA0062.2;-5;0.0141022;6.71266;1;11;TCCCAGCTACTTTGGGA;GCCACTTCCGG;-!SP1#MA0079.1;0;0.0187445;8.92236;1;10;TCCCAGCTACTTTGGGA;ACCCCGCCCC;-!ZMS1#MA0441.1;1;0.0201308;9.58224;1;8;TCCCAGCTACTTTGGGA;TTCCCCGCA;+!AG#MA0005.1;-4;0.020794;9.89795;1;11;TCCCAGCTACTTTGGGA;ACCAAATTTGG;- | |||
}} | }} |
Latest revision as of 18:17, 7 September 2012
Full Name: TOPORS
Motif matrix | |
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
ACE2#MA0267.1 | -1 | 0.00247989 | 1.18043 | 1 | 7 | TCCCAGCTACTTTGGGA | ACCAGCA | + |
CRZ1#MA0285.1 | -1 | 0.00639935 | 3.04609 | 1 | 9 | TCCCAGCTACTTTGGGA | CTAAGCCAC | + |
NHLH1#MA0048.1 | 0 | 0.00706518 | 3.36303 | 1 | 12 | TCCCAGCTACTTTGGGA | GCGCAGCTGCGT | + |
YGR067C#MA0425.1 | 0 | 0.00912306 | 4.34258 | 1 | 14 | TCCCAGCTACTTTGGGA | ACCCCACTTTTTTG | + |
SWI5#MA0402.1 | 0 | 0.00989572 | 4.71036 | 1 | 8 | TCCCAGCTACTTTGGGA | AACCAGCA | - |
GABPA#MA0062.2 | -5 | 0.0141022 | 6.71266 | 1 | 11 | TCCCAGCTACTTTGGGA | GCCACTTCCGG | - |
SP1#MA0079.1 | 0 | 0.0187445 | 8.92236 | 1 | 10 | TCCCAGCTACTTTGGGA | ACCCCGCCCC | - |
ZMS1#MA0441.1 | 1 | 0.0201308 | 9.58224 | 1 | 8 | TCCCAGCTACTTTGGGA | TTCCCCGCA | + |
AG#MA0005.1 | -4 | 0.020794 | 9.89795 | 1 | 11 | TCCCAGCTACTTTGGGA | ACCAAATTTGG | - |